RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NOS3P29474 1203 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 RPL4P36578 427 aaKnown RBP9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SMSP52788 366 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 CTBP2P56545 445 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 PRPS1P60891 318 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 IL5RAQ01344 420 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 IL18R1Q13478 541 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 ANKDD1AQ495B1 522 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC36A3Q495N2 470 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SYT14P1Q58G82 188 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM69AQ5T7M9 428 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 C1orf140Q5VVS0 124 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 KLHL17Q6TDP4 642 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 RASSF6Q6ZTQ3 369 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 TSPYL5Q86VY4 417 aaPredicted RBP9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 P3H2Q8IVL5 708 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC43A2Q8N370 569 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 GTPBP8Q8N3Z3 284 aaPredicted RBP9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC25A36Q96CQ1 311 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 FUZQ9BT04 418 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 GABARAPL3Q9BY60 117 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 TTTY12Q9BZ98 90 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 ADNPQ9H2P0 1102 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 FKRPQ9H9S5 495 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 CDH10Q9Y6N8 788 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 EML6Q6ZMW3 1958 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 A0A0G2JMM0 328 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 LOC100130705A0A1B0GUX0 176 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 A0A1W2PPB8 328 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 A0A1W2PRS3 328 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 TMEM72A0PK05 275 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 C7orf72A4D263 438 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 KIR3DP1A8MWS1 328 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 C1QTNF9BB2RNN3 333 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 M0R3G1 203 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 MPZL2O60487 215 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 MITFO75030 526 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 OR7A10O76100 309 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 NDUFB2O95178 105 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 IGF2P01344 180 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ITGB2P05107 769 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 C1QTNF9P0C862 333 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 PEPDP12955 493 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF24P17028 368 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 FUT1P19526 365 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 POU3F2P20265 443 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC6A6P31641 620 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SFTPDP35247 375 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 OMPP47874 163 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 GSSP48637 474 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CLK1P49759 484 aaKnown RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CRISP1P54107 249 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 PPIAP62937 165 aaKnown RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CSNK2A1P68400 391 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 KEAP1Q14145 624 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF169Q14929 603 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 INPP5JQ15735 1006 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC25A53Q5H9E4 307 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF770Q6IQ21 691 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC27A4Q6P1M0 643 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SMARCD3Q6STE5 483 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 IGFL2Q6UWQ7 119 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CD300LDQ6UXZ3 194 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 WDR88Q6ZMY6 472 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 TMPRSS11FQ6ZWK6 438 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CHMP1BQ7LBR1 199 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZER1Q7Z7L7 766 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM109AQ8N4B1 249 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CLDN22Q8N7P3 220 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM83FQ8NEG4 500 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 OR2T33Q8NG76 320 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM81AQ8TBF8 368 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 SCMH1Q96GD3 660 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 OR5B2Q96R09 309 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF426Q9BUY5 554 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 IFT27Q9BW83 186 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 HES7Q9BYE0 225 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 TMEM185BQ9H7F4 350 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 TIGARQ9NQ88 270 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM118AQ9NWS6 357 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 QPCTLQ9NXS2 382 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 TMEFF2Q9UIK5 374 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF229Q9UJW7 825 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 CORINQ9Y5Q5 1042 aa9.3□□□□□ -0.92
PRPF38A-202ENST00000474048 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 LRRC3CA6NJW4 275 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 SNTNA6NMZ2 147 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 SHISA8B8ZZ34 492 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 BLOC1S5-TXNDC5H3BN57 136 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 SULT2B1O00204 365 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 LYPD3O95274 346 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 IFNGP01579 166 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MST1P26927 711 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 RFC3P40938 356 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR2B6P58173 313 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 PMS2P3Q13401 168 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC10A1Q14973 349 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms