RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MTDHQ86UE4 582 aaKnown RBP16.86■□□□□ 0.29
PTCD3-210ENST00000473829 CALHM3Q86XJ0 350 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 OR8J3Q8NGG0 315 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 SLC35B4Q969S0 331 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 LURAP1Q96LR2 239 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF300Q96RE9 604 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF607Q96SK3 696 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 SPATA5L1Q9BVQ7 753 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 PRR14Q9BWN1 585 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 SLC24A3Q9HC58 644 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 HDGFL3Q9Y3E1 203 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 FREM1Q5H8C1 2179 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 TMEM229AB2RXF0 380 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 SNX3O60493 162 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 RAMP1O60894 148 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 CD79BP40259 229 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 CLK1P49759 484 aaKnown RBP16.85■□□□□ 0.29
PTCD3-210ENST00000473829 CRYBA2P53672 197 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 COPZ1P61923 177 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 GNGT1P63211 74 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 EXOC3L2Q2M3D2 409 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 GTF2IRD2BQ6EKJ0 949 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 ATG4DQ86TL0 474 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-210ENST00000473829 GTF2IRD2Q86UP8 949 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 ARMC8Q8IUR7 673 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 SLC43A2Q8N370 569 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 SMYD1Q8NB12 490 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 GPR32P1Q8NGA4 272 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 FAM222BQ8WU58 562 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 DDIT4LQ96D03 193 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 BCO1Q9HAY6 547 aa16.85■□□□□ 0.29
PTCD3-210ENST00000473829 POLQO75417 2590 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 GMNCA6NCL1 334 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 PRORSD1PA6NEY8 169 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 TPST2O60704 377 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 CCDC22O60826 627 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 NPPAP01160 153 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 COX4I1P13073 169 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 POU2F1P14859 743 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 CXCR1P25024 350 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 EDNRAP25101 427 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 FKBP2P26885 142 aaKnown RBP16.84■□□□□ 0.29
PTCD3-210ENST00000473829 OR2B6P58173 313 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 RASGEF1BQ0VAM2 473 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 VMACQ2NL98 169 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 PCYOX1LQ8NBM8 494 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 RP9Q8TA86 221 aaKnown RBP16.84■□□□□ 0.29
PTCD3-210ENST00000473829 TAMM41Q96BW9 452 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 MYLK2Q9H1R3 596 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 GP6Q9HCN6 339 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 TMEM181Q9P2C4 612 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 KLHL9Q9P2J3 617 aa16.84■□□□□ 0.29
PTCD3-210ENST00000473829 SH3D21A4FU49 640 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 ZNF716A6NP11 495 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 M0QX08 132 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 SERPINB7O75635 380 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 YES1P07947 543 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 UGT2B10P36537 528 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 KCNJ5P48544 419 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 PCYT1AP49585 367 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 MAP2K6P52564 334 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 DUSP7Q16829 419 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 TMEM201Q5SNT2 666 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 TFAP2EQ6VUC0 442 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 TMEM200AQ86VY9 491 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 CCDC103Q8IW40 242 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 ZNF775Q96BV0 537 aaPredicted RBP16.83■□□□□ 0.28
PTCD3-210ENST00000473829 ZNF583Q96ND8 569 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.28
PTCD3-210ENST00000473829 NSRP1Q9H0G5 558 aaKnown RBP16.83■□□□□ 0.28
PTCD3-210ENST00000473829 GID8Q9NWU2 228 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 ELOVL5Q9NYP7 299 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 GMPR2Q9P2T1 348 aaKnown RBP16.83■□□□□ 0.28
PTCD3-210ENST00000473829 PRDM4Q9UKN5 801 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 TRAPPC4Q9Y296 219 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 TESMINQ9Y4I5 508 aa16.83■□□□□ 0.28
PTCD3-210ENST00000473829 A0A1B0GWA3 101 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 FAM221AA4D161 298 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 CCT8L1PA6NM43 557 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 A6NNC1 897 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 M0R3H8 397 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 DNPH1O43598 174 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 NPIPB7O75200 414 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 CTAG2O75638 210 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 EPXP11678 715 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 CD247P20963 164 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 FPR1P21462 350 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 RGS8P57771 180 aaPredicted RBP16.82■□□□□ 0.28
PTCD3-210ENST00000473829 H3F3AP84243 136 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 C6orf89Q6UWU4 347 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 C22orf34Q6ZV56 151 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.82■□□□□ 0.28
PTCD3-210ENST00000473829 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 SLC30A8Q8IWU4 369 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 LSMEM1Q8N8F7 131 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 OR4D11Q8NGI4 311 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 ARHGDIGQ99819 225 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 SH3GL1Q99961 368 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 ECSITQ9BQ95 431 aa16.82■□□□□ 0.28
PTCD3-210ENST00000473829 POTEKPQ9BYX7 375 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms