RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 EMC2Q15006 297 aa2□□□□□ -2.09
CALD1-216ENST00000473714 P2RY14Q15391 338 aa2□□□□□ -2.09
CALD1-216ENST00000473714 OR1C1Q15619 314 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TRIP10Q15642 601 aa2□□□□□ -2.09
CALD1-216ENST00000473714 PDK4Q16654 411 aa2□□□□□ -2.09
CALD1-216ENST00000473714 PARP6Q2NL67 630 aa2□□□□□ -2.09
CALD1-216ENST00000473714 KRT71Q3SY84 523 aa2□□□□□ -2.09
CALD1-216ENST00000473714 ZNF585BQ52M93 769 aa2□□□□□ -2.09
CALD1-216ENST00000473714 XKR6Q5GH73 641 aa2□□□□□ -2.09
CALD1-216ENST00000473714 ZNF311Q5JNZ3 666 aa2□□□□□ -2.09
CALD1-216ENST00000473714 FFAR4Q5NUL3 377 aa2□□□□□ -2.09
CALD1-216ENST00000473714 WLSQ5T9L3 541 aa2□□□□□ -2.09
CALD1-216ENST00000473714 GFI1BQ5VTD9 330 aa2□□□□□ -2.09
CALD1-216ENST00000473714 C9orf57Q5W0N0 161 aa2□□□□□ -2.09
CALD1-216ENST00000473714 FAM159AQ6UWV7 190 aa2□□□□□ -2.09
CALD1-216ENST00000473714 GCNT7Q6ZNI0 430 aa2□□□□□ -2.09
CALD1-216ENST00000473714 Q6ZRG5 221 aa2□□□□□ -2.09
CALD1-216ENST00000473714 C9orf47Q6ZRZ4 202 aa2□□□□□ -2.09
CALD1-216ENST00000473714 Q6ZVQ6 151 aa2□□□□□ -2.09
CALD1-216ENST00000473714 IL17RELQ6ZVW7 336 aa2□□□□□ -2.09
CALD1-216ENST00000473714 CENPUQ71F23 418 aa2□□□□□ -2.09
CALD1-216ENST00000473714 LRRC70Q7Z2Q7 622 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TRPT1Q86TN4 253 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 C17orf64Q86WR6 236 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TBC1D10CQ8IV04 446 aa2□□□□□ -2.09
CALD1-216ENST00000473714 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 BCORP1Q8N888 145 aa2□□□□□ -2.09
CALD1-216ENST00000473714 ZNF397Q8NF99 534 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 OR1L3Q8NH93 324 aa2□□□□□ -2.09
CALD1-216ENST00000473714 LMO3Q8TAP4 145 aa2□□□□□ -2.09
CALD1-216ENST00000473714 GOLGA5Q8TBA6 731 aa2□□□□□ -2.09
CALD1-216ENST00000473714 RDH11Q8TC12 318 aa2□□□□□ -2.09
CALD1-216ENST00000473714 FBXO25Q8TCJ0 367 aa2□□□□□ -2.09
CALD1-216ENST00000473714 PNPT1Q8TCS8 783 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 SMAP2Q8WU79 429 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 PHF10Q8WUB8 498 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 CHPT1Q8WUD6 406 aa2□□□□□ -2.09
CALD1-216ENST00000473714 DYRK2Q92630 601 aa2□□□□□ -2.09
CALD1-216ENST00000473714 KLK6Q92876 244 aa2□□□□□ -2.09
CALD1-216ENST00000473714 MRPL24Q96A35 216 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 ZNF486Q96H40 463 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 SENP5Q96HI0 755 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 HPDLQ96IR7 371 aa2□□□□□ -2.09
CALD1-216ENST00000473714 ELMO2Q96JJ3 720 aa2□□□□□ -2.09
CALD1-216ENST00000473714 UHRF2Q96PU4 802 aa2□□□□□ -2.09
CALD1-216ENST00000473714 VPS35Q96QK1 796 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TSPAN18Q96SJ8 248 aa2□□□□□ -2.09
CALD1-216ENST00000473714 GPA33Q99795 319 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TCHPQ9BT92 498 aa2□□□□□ -2.09
CALD1-216ENST00000473714 NDUFAF3Q9BU61 184 aa2□□□□□ -2.09
CALD1-216ENST00000473714 BEX2Q9BXY8 128 aa2□□□□□ -2.09
CALD1-216ENST00000473714 NFKBIZQ9BYH8 718 aa2□□□□□ -2.09
CALD1-216ENST00000473714 NLNQ9BYT8 704 aa2□□□□□ -2.09
CALD1-216ENST00000473714 TCEAL2Q9H3H9 227 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 RMND5AQ9H871 391 aa2□□□□□ -2.09
CALD1-216ENST00000473714 DDX31Q9H8H2 851 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 PLEKHF2Q9H8W4 249 aa2□□□□□ -2.09
CALD1-216ENST00000473714 LRRC40Q9H9A6 602 aa2□□□□□ -2.09
CALD1-216ENST00000473714 PLEKHA3Q9HB20 300 aa2□□□□□ -2.09
CALD1-216ENST00000473714 SIX2Q9NPC8 291 aa2□□□□□ -2.09
CALD1-216ENST00000473714 B3GAT2Q9NPZ5 323 aa2□□□□□ -2.09
CALD1-216ENST00000473714 XPNPEP1Q9NQW7 623 aa2□□□□□ -2.09
CALD1-216ENST00000473714 FBXO8Q9NRD0 319 aa2□□□□□ -2.09
CALD1-216ENST00000473714 RBM28Q9NW13 759 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 C6orf203Q9P0P8 240 aaPredicted RBP2□□□□□ -2.09
CALD1-216ENST00000473714 TUBGCP4Q9UGJ1 667 aa2□□□□□ -2.09
CALD1-216ENST00000473714 CLEC4EQ9ULY5 219 aa2□□□□□ -2.09
CALD1-216ENST00000473714 DIMT1Q9UNQ2 313 aaKnown RBP2□□□□□ -2.09
CALD1-216ENST00000473714 PPP1R3CQ9UQK1 317 aa2□□□□□ -2.09
CALD1-216ENST00000473714 MEMO1Q9Y316 297 aa2□□□□□ -2.09
CALD1-216ENST00000473714 ATG4BQ9Y4P1 393 aa2□□□□□ -2.09
CALD1-216ENST00000473714 MED12Q93074 2177 aa2□□□□□ -2.09
CALD1-216ENST00000473714 PLXNB1O43157 2135 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 IGHV5-10-1A0A0J9YXX1 117 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 SPTY2D1-AS1A0A0U1RR47 76 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 A0A1B0GWJ7 208 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 FAM172BPA6NC97 362 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 PCP4L1A6NKN8 68 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 C21orf140B9A014 251 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 LMO7DNF2Z398 122 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 K7EQM0 130 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 HIP1O00291 1037 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 PDXKO00764 312 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 SLC31A1O15431 190 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 COCHO43405 550 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 TSC22D2O75157 780 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 MTRF1O75570 445 aaKnown RBP1.99□□□□□ -2.09
CALD1-216ENST00000473714 TOXO94900 526 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 NXPH2O95156 264 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 MBD3O95983 291 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 CLPTM1O96005 669 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 IGHEP01854 428 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 F7P08709 466 aaPredicted RBP1.99□□□□□ -2.09
CALD1-216ENST00000473714 SLC35G4P0C7Q5 338 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 ZCCHC18P0CG32 403 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 CLUP10909 449 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 GP9P14770 177 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 KCNE1P15382 129 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 C4BPBP20851 252 aa1.99□□□□□ -2.09
CALD1-216ENST00000473714 UGT1A4P22310 534 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms