RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ZNF23P17027 643 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SHC1P29353 583 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SFTPDP35247 375 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 MAP2K6P52564 334 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 RAC1P63000 192 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 EGR4Q05215 589 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 RIPK1Q13546 671 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SYT14P1Q58G82 188 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SHQ1Q6PI26 577 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 TBPL2Q6SJ96 375 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 MED12LQ86YW9 2145 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 NRMQ8IXM6 262 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 OR5K1Q8NHB7 308 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 PFN4Q8NHR9 129 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 STK35Q8TDR2 534 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 FAR1Q8WVX9 515 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 DDIT4LQ96D03 193 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 DNAJA3Q96EY1 480 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 GPR137Q96N19 417 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 DOCK7Q96N67 2140 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 BARD1Q99728 777 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 RNPEPL1Q9HAU8 725 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 MEPEQ9NQ76 525 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 STX18Q9P2W9 335 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 SPRR3Q9UBC9 169 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 NKX1-2Q9UD57 310 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 AP4B1Q9Y6B7 739 aa11.31□□□□□ -0.6
TRAPPC12-217ENST00000473348 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 GJE1A6NN92 205 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 ENO4A6NNW6 628 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 TTLL8A6PVC2 850 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 SEC14L5O43304 696 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 OR10H3O60404 316 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 NPIPB7O75200 414 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 AHSA1O95433 338 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 IFI30P13284 250 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 BMP7P18075 431 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 FKBP2P26885 142 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 STARP49675 285 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 LHX2P50458 406 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 HSF1Q00613 529 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 CRYZQ08257 329 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 NFATC3Q12968 1075 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 MICAQ29983 383 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 NHSL2Q5HYW2 709 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 C1orf140Q5VVS0 124 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 C5orf46Q6UWT4 87 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 GGNQ86UU5 652 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 OR9Q2Q8NGE9 314 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 PIGXQ8TBF5 258 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 KTI12Q96EK9 354 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 NRBF2Q96F24 287 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 ASF1BQ9NVP2 202 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 TNFRSF10DQ9UBN6 386 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 OAZ3Q9UMX2 235 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 TMEM5Q9Y2B1 443 aa11.3□□□□□ -0.6
TRAPPC12-217ENST00000473348 BSNQ9UPA5 3926 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 A0A1B0GVC2 190 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 G3V2T6 193 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 AQP7O14520 342 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 IDUAP35475 653 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 GPR4P46093 362 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 RPS5P46782 204 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 CLK1P49759 484 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 ARHGDIAP52565 204 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 CTBP2P56545 445 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 CLDN18P56856 261 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 CLDN20P56880 219 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 PRKCDQ05655 676 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 SLC34A1Q06495 639 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 MYBPHQ13203 477 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 TRIP10Q15642 601 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 VASNQ6EMK4 673 aa11.29□□□□□ -0.6
TRAPPC12-217ENST00000473348 PGBD2Q6P3X8 592 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms