RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
CLK1-209ENST00000472679 V9GY05 133 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 PLEKHH1Q9ULM0 1364 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 A0A0G2JLM5 398 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 A6NIZ1 184 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 GJE1A6NN92 205 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 FAM189A1O60320 539 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 TPST2O60704 377 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 KLF8O95600 359 aaPredicted RBP3.57□□□□□ -1.84
CLK1-209ENST00000472679 STAMBPO95630 424 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 IGHG4P01861 327 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 LGALS2P05162 132 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 TOP1P11387 765 aaKnown RBP3.57□□□□□ -1.84
CLK1-209ENST00000472679 NPR2P20594 1047 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 CHI3L1P36222 383 aaPredicted RBP3.57□□□□□ -1.84
CLK1-209ENST00000472679 RAP1BP61224 184 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 SELENOTP62341 195 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 KLHL30Q0D2K2 578 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 C1orf61Q13536 156 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 GRB7Q14451 532 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 PDK4Q16654 411 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 PRSS41Q7RTY9 318 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 OR4D5Q8NGN0 318 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 SLC25A39Q9BZJ4 359 aaPredicted RBP3.57□□□□□ -1.84
CLK1-209ENST00000472679 RIBC2Q9H4K1 309 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 SLC25A22Q9H936 323 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 PCSK1NQ9UHG2 260 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 ZNF225Q9UK10 706 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 STAP1Q9ULZ2 295 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 ASF1AQ9Y294 204 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 MEMO1Q9Y316 297 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 AP1M2Q9Y6Q5 423 aa3.57□□□□□ -1.84
CLK1-209ENST00000472679 ARHGAP21Q5T5U3 1957 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 FRMPD3Q5JV73 1810 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 IGHV1OR21-1A0A087WYE8 117 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 PRRG1O14668 218 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 TBX19O60806 448 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 IQCF3P0C7M6 154 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 ZNF853P0CG23 659 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 ZNF32P17041 273 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 HNF1AP20823 631 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 CXCR2P25025 360 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 ANXA13P27216 316 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 PRDX3P30048 256 aaKnown RBP3.56□□□□□ -1.84
CLK1-209ENST00000472679 SOX6P35712 828 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 TDO2P48775 406 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 PPT1P50897 306 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 BCL7AQ4VC05 210 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 C1orf100Q5SVJ3 147 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 OR2G6Q5TZ20 316 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 CYB5R2Q6BCY4 276 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 ACP7Q6ZNF0 438 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 RALGPS2Q86X27 583 aaPredicted RBP3.56□□□□□ -1.84
CLK1-209ENST00000472679 RDH10Q8IZV5 341 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 FTMTQ8N4E7 242 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 ARIH2OSQ8N7S6 290 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 SYT14Q8NB59 555 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 OR51S1Q8NGJ8 323 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 KCNA7Q96RP8 456 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 RASL11BQ9BPW5 248 aa3.56□□□□□ -1.84
CLK1-209ENST00000472679 POLR1EQ9GZS1 481 aaKnown RBP3.56□□□□□ -1.84
CLK1-209ENST00000472679 SUDS3Q9H7L9 328 aaPredicted RBP3.56□□□□□ -1.84
CLK1-209ENST00000472679 SMPD3Q9NY59 655 aaPredicted RBP3.56□□□□□ -1.84
CLK1-209ENST00000472679 SH3TC1Q8TE82 1336 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 E9PBE3 544 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 MBTPS2O43462 519 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 TNFSF13O75888 250 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 P04436 131 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 PNMTP11086 282 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 RPA2P15927 270 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 HNRNPA2B1P22626 353 aaKnown RBP3.55□□□□□ -1.84
CLK1-209ENST00000472679 CCNCP24863 283 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 LAP3P28838 519 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 SHMT2P34897 504 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 CBX1P83916 185 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 RIPK1Q13546 671 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 TPD52L1Q16890 204 aaPredicted RBP3.55□□□□□ -1.84
CLK1-209ENST00000472679 TTC23Q5W5X9 447 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 SLC25A24Q6NUK1 477 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 MFSD6LQ8IWD5 586 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 TMEM123Q8N131 208 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 ANKFN1Q8N957 763 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 HTR3CQ8WXA8 447 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 THRSPQ92748 146 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 TGM7Q96PF1 710 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 SELENOIQ9C0D9 397 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 C20orf85Q9H1P6 137 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 FOLH1BQ9HBA9 442 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 CGNQ9P2M7 1197 aaKnown RBP3.55□□□□□ -1.84
CLK1-209ENST00000472679 PRPF19Q9UMS4 504 aaKnown RBP3.55□□□□□ -1.84
CLK1-209ENST00000472679 TP53TG5Q9Y2B4 290 aa3.55□□□□□ -1.84
CLK1-209ENST00000472679 A6NDX4 124 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 FAM166BA8MTA8 275 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 PFKFB2O60825 505 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 GUCA1CO95843 209 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 MOSP00540 346 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 OPN1MWP04001 364 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms