RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TREML4Q6UXN2 200 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 CLHC1Q8NHS4 586 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 DCAKDQ8WVC6 231 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 FCRL1Q96LA6 429 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 LRRC37BQ96QE4 947 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 OR11A1Q9GZK7 315 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 LPAR2Q9HBW0 351 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 ZDHHC18Q9NUE0 388 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 GPATCH2Q9NW75 528 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 C1orf109Q9NX04 203 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 CRNNQ9UBG3 495 aaPredicted RBP16.45■□□□□ 0.22
SORT1-203ENST00000471996 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 TRAPPC4Q9Y296 219 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 VSTM5A8MXK1 200 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 POC1B-GALNT4F8VUJ3 575 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CRCPO75575 148 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CSTAP01040 98 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 SNRPAP09012 282 aaKnown RBP16.44■□□□□ 0.22
SORT1-203ENST00000471996 CECR9P0C854 216 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 UBTFL6P0CB48 400 aaPredicted RBP16.44■□□□□ 0.22
SORT1-203ENST00000471996 NPR2P20594 1047 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CALCRP30988 508 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 THBS4P35443 961 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 ASMTP46597 345 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CCT3P49368 545 aaKnown RBP16.44■□□□□ 0.22
SORT1-203ENST00000471996 IL1RL1Q01638 556 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 SLC17A1Q14916 467 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 ZNF141Q15928 474 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 C3orf36Q3SXR2 165 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 TBRG1Q3YBR2 411 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 MIDNQ504T8 468 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 SPATA21Q7Z572 469 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 TEX29Q8N6K0 151 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 LRRC17Q8N6Y2 441 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CCNYL1Q8N7R7 359 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 OR56A1Q8NGH5 318 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 CLDND2Q8NHS1 167 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 TMEM45BQ96B21 275 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 SDF2Q99470 211 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 DYNLRB1Q9NP97 96 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 TMEM45AQ9NWC5 275 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 TMEM181Q9P2C4 612 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 KCNE5Q9UJ90 142 aa16.44■□□□□ 0.22
SORT1-203ENST00000471996 SH3PXD2BA1X283 911 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 H3BQF6 201 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 EIF1BO60739 113 aaKnown RBP16.43■□□□□ 0.22
SORT1-203ENST00000471996 IGLV1-44P01699 117 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 HGFACQ04756 655 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 TP53BP2Q13625 1128 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 FAHD2BQ6P2I3 314 aaPredicted RBP16.43■□□□□ 0.22
SORT1-203ENST00000471996 C1orf229Q6ZS94 237 aaPredicted RBP16.43■□□□□ 0.22
SORT1-203ENST00000471996 GRINAQ7Z429 371 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 LCA5Q86VQ0 697 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 ADGRG3Q86Y34 549 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 RELL1Q8IUW5 271 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 OR1K1Q8NGR3 316 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 OR51F2Q8NH61 342 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 MTERF3Q96E29 417 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 FAHD2AQ96GK7 314 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 ANKRD27Q96NW4 1050 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 NAA11Q9BSU3 229 aaPredicted RBP16.43■□□□□ 0.22
SORT1-203ENST00000471996 SUCNR1Q9BXA5 334 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 RACGAP1Q9H0H5 632 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 CMYA5Q8N3K9 4069 aa16.43■□□□□ 0.22
SORT1-203ENST00000471996 SLC28A1O00337 649 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 TFP02787 698 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 ADRA2AP08913 450 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 UBE2NP61088 152 aaKnown RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 SLC35A1P78382 337 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 FOXL1Q12952 345 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 GPR68Q15743 365 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 EIF3MQ7L2H7 374 aaKnown RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 R3HCC1LQ7Z5L2 792 aaKnown RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 ABHD12BQ7Z5M8 362 aaPredicted RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 CDK20Q8IZL9 346 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 ZNF563Q8TA94 476 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 PSMA8Q8TAA3 256 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 CKAP2Q8WWK9 683 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 MRPL24Q96A35 216 aaKnown RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 OR7D2Q96RA2 312 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 CDC42EP4Q9H3Q1 356 aaKnown RBP16.42■□□□□ 0.22
SORT1-203ENST00000471996 SEC61A2Q9H9S3 476 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 TNFRSF12AQ9NP84 129 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 PTGDR2Q9Y5Y4 395 aa16.42■□□□□ 0.22
SORT1-203ENST00000471996 LOC105371242A0A075B767 164 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 ARPC4-TTLL3A0A0A6YYG9 625 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 TRAV20A0A0B4J274 112 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 CENPVL1A0A0U1RR11 272 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 UGT2B17O75795 530 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 PNPP00491 289 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 GSTA1P08263 222 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 GAAP10253 952 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 SAGP10523 405 aaPredicted RBP16.41■□□□□ 0.22
SORT1-203ENST00000471996 UROSP10746 265 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 GPR6P46095 362 aaPredicted RBP16.41■□□□□ 0.22
SORT1-203ENST00000471996 RFTN2Q52LD8 501 aaPredicted RBP16.41■□□□□ 0.22
SORT1-203ENST00000471996 TIFABQ6ZNK6 161 aa16.41■□□□□ 0.22
SORT1-203ENST00000471996 AAED1Q7RTV5 226 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms