RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SOCS2O14508 198 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 CASQ2O14958 399 aaPredicted RBP17.31■□□□□ 0.36
PSPC1-203ENST00000471658 ZNHIT1O43257 154 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 POU2F1P14859 743 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 ZNF17P17021 662 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SFTPDP35247 375 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 RBM34P42696 430 aaKnown RBP17.31■□□□□ 0.36
PSPC1-203ENST00000471658 CRYZQ08257 329 aaKnown RBP17.31■□□□□ 0.36
PSPC1-203ENST00000471658 RRM2BQ7LG56 351 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 HIPK1Q86Z02 1210 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SVOPLQ8N434 492 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 CBR4Q8N4T8 237 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 CISD2Q8N5K1 135 aaKnown RBP17.31■□□□□ 0.36
PSPC1-203ENST00000471658 EME1Q96AY2 570 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 NRBF2Q96F24 287 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 FEVQ99581 238 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 TMEM43Q9BTV4 400 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 ACKR4Q9NPB9 350 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SERINC1Q9NRX5 453 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 TNFRSF10DQ9UBN6 386 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 MED31Q9Y3C7 131 aa17.31■□□□□ 0.36
PSPC1-203ENST00000471658 SPENQ96T58 3664 aaKnown RBP17.3■□□□□ 0.36
PSPC1-203ENST00000471658 A8MVM7 634 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 H0YC42 278 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 ERVH48-1M5A8F1 160 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 NPIPB7O75200 414 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 TFPIP10646 304 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 IFI30P13284 250 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 FUT1P19526 365 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 MAKP20794 623 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 CBLP22681 906 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 OMPP47874 163 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 ARHGDIAP52565 204 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 TPD52P55327 224 aaPredicted RBP17.3■□□□□ 0.36
PSPC1-203ENST00000471658 LTBQ06643 244 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 TMEM176BQ3YBM2 270 aaPredicted RBP17.3■□□□□ 0.36
PSPC1-203ENST00000471658 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 TAAR8Q969N4 342 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 FAM46AQ96IP4 442 aaKnown RBP17.3■□□□□ 0.36
PSPC1-203ENST00000471658 NBEAQ8NFP9 2946 aa17.3■□□□□ 0.36
PSPC1-203ENST00000471658 A0A1W2PNR3 127 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 ENO4A6NNW6 628 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 GPR4P46093 362 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 RPS5P46782 204 aaKnown RBP17.29■□□□□ 0.36
PSPC1-203ENST00000471658 DAPP51397 102 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 CLDN20P56880 219 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 PRKCDQ05655 676 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 SELENBP1Q13228 472 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 OGFRL1Q5TC84 451 aaPredicted RBP17.29■□□□□ 0.36
PSPC1-203ENST00000471658 C3orf33Q6P1S2 294 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 ZBTB49Q6ZSB9 765 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 RNF113BQ8IZP6 322 aaKnown RBP17.29■□□□□ 0.36
PSPC1-203ENST00000471658 AQP11Q8NBQ7 271 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 PIGXQ8TBF5 258 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 GTPBP3Q969Y2 492 aaKnown RBP17.29■□□□□ 0.36
PSPC1-203ENST00000471658 DTNBP1Q96EV8 351 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 NIPSNAP1Q9BPW8 284 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 PTDSS2Q9BVG9 487 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 LDAHQ9H6V9 325 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 TRGV5A0A0B4J1U4 118 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 EI24O14681 340 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 ZNF208O43345 1280 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 CH25HO95992 272 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 BMP7P18075 431 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 ELK4P28324 431 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 RAC1P63000 192 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 HSF1Q00613 529 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 GK3PQ14409 553 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 INAQ16352 499 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 PRR30Q53SZ7 412 aaPredicted RBP17.29■□□□□ 0.36
PSPC1-203ENST00000471658 SYT14P1Q58G82 188 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 C1orf140Q5VVS0 124 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 GALNT4Q8N4A0 578 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 LRRC17Q8N6Y2 441 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 NEIL3Q8TAT5 605 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 STK35Q8TDR2 534 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 DDIT4LQ96D03 193 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 BPIFA2Q96DR5 249 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 EXO5Q9H790 373 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 SPRR3Q9UBC9 169 aa17.29■□□□□ 0.36
PSPC1-203ENST00000471658 CDC42EP2O14613 210 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 MITFO75030 526 aaPredicted RBP17.28■□□□□ 0.36
PSPC1-203ENST00000471658 IGHG3P01860 377 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 IMPDH2P12268 514 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 CHMP24386 653 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 PTDSS1P48651 473 aaKnown RBP17.28■□□□□ 0.36
PSPC1-203ENST00000471658 SUCLG1P53597 346 aaKnown RBP17.28■□□□□ 0.36
PSPC1-203ENST00000471658 CTBP2P56545 445 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 CLDN15P56746 228 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 KLRB1Q12918 225 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.28■□□□□ 0.364e-11■□□□□ 9.3
PSPC1-203ENST00000471658 C1orf94Q6P1W5 598 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 FAHD1Q6P587 224 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 UBQLNLQ8IYU4 475 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 ATG16L2Q8NAA4 619 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 MAGEE2Q8TD90 523 aaPredicted RBP17.28■□□□□ 0.36
PSPC1-203ENST00000471658 MOGAT1Q96PD6 335 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms