RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 ATP23Q9Y6H3 246 aa8.02□□□□□ -1.13
CPSF4-211ENST00000471455 NPIPA5A0A0B4J1W7 369 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 C9JVG2 144 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 NPIPA7E9PJI5 369 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 COPEO14579 308 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CFLARO15519 480 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PLIN3O60664 434 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 STX11O75558 287 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CYP7B1O75881 506 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PMS2P2O95744 297 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 AGR2O95994 175 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 WNT11O96014 354 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CSTAP01040 98 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 LINC00032P0C843 101 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 NPIPA8P0DM63 369 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 EFNA1P20827 205 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PTNP21246 168 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 APOBEC3AP31941 199 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CRHR1P34998 444 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SOAT1P35610 550 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 MAGEA8P43361 318 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CLK1P49759 484 aaKnown RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SLC16A1P53985 500 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SESN3P58005 492 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PHC1P78364 1004 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SKP2Q13309 424 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 NDUFAF6Q330K2 333 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 FAM153CQ494X1 144 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ATP6AP1LQ52LC2 224 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 RFTN2Q52LD8 501 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PDZK1Q5T2W1 519 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 C16orf62Q7Z3J2 963 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 NOA1Q8NC60 698 aaKnown RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ZNF540Q8NDQ6 660 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 OR2T11Q8NH01 316 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ZNF563Q8TA94 476 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 EPS8L3Q8TE67 593 aaKnown RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ZNF75CPQ92670 426 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 KCNS3Q9BQ31 491 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 THUMPD3Q9BV44 507 aaKnown RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ANKZF1Q9H8Y5 726 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CHODLQ9H9P2 273 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 MOV10Q9HCE1 1003 aaKnown RBP8.01□□□□□ -1.13
CPSF4-211ENST00000471455 ACER3Q9NUN7 267 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 EXD2Q9NVH0 621 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 GPATCH2Q9NW75 528 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 UPB1Q9UBR1 384 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 CHRNA9Q9UGM1 479 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SLC35A3Q9Y2D2 325 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 SLC9A8Q9Y2E8 581 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 PTGDR2Q9Y5Y4 395 aa8.01□□□□□ -1.13
CPSF4-211ENST00000471455 EIF1BO60739 113 aaKnown RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 DNAJA2O60884 412 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 C6orf47O95873 294 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 IGHV3-9P01782 118 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 ERCC1P07992 297 aaPredicted RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 UBTFL6P0CB48 400 aaPredicted RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 LAMP1P11279 417 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 APEHP13798 732 aaKnown RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 PRPS1L1P21108 318 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 IGFBP5P24593 272 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 HTR3AP46098 478 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 HPCAP84074 193 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 SPOCK1Q08629 439 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 GGTLC2Q14390 218 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 GPR68Q15743 365 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 ZNF141Q15928 474 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 FAM120AOSQ5T036 256 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 ATAD3BQ5T9A4 648 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 CASP12Q6UXS9 341 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 B3GLCTQ6Y288 498 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 GRINAQ7Z429 371 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 ABHD12BQ7Z5M8 362 aaPredicted RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 OR7A2PQ8NGA2 310 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 MZB1Q8WU39 189 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 TWIST2Q8WVJ9 160 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 MUS81Q96NY9 551 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 OR7D2Q96RA2 312 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 SDF2Q99470 211 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 NAA11Q9BSU3 229 aaPredicted RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 QRSL1Q9H0R6 528 aaKnown RBP8□□□□□ -1.13
CPSF4-211ENST00000471455 TNFRSF12AQ9NP84 129 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 OBP2BQ9NPH6 170 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 TRAF6Q9Y4K3 522 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 DNAJC15Q9Y5T4 150 aa8□□□□□ -1.13
CPSF4-211ENST00000471455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8□□□□□ -1.13
CPSF4-211ENST00000471455 LOC390937A0A1W2PQ73 354 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 MEGF11A6BM72 1044 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 ZNF716A6NP11 495 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 PIP5K1BO14986 540 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 KIAA0513O60268 411 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 TRIM13O60858 407 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 PGRP06401 933 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 GUSBP08236 651 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 FGF4P08620 206 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 UQCRBP14927 111 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 PCMT1P22061 227 aa7.99□□□□□ -1.13
CPSF4-211ENST00000471455 EDNRAP25101 427 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms