RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMEM239Q8WW34 195 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ZBTB8AQ96BR9 441 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 NRBF2Q96F24 287 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 WDYHV1Q96HA8 205 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 MPP4Q96JB8 637 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 C5orf34Q96MH7 638 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ALPK1Q96QP1 1244 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 DDOQ99489 341 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 TIMP4Q99727 224 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 OSBPL10Q9BXB5 764 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 SRXN1Q9BYN0 137 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 SLC25A18Q9H1K4 315 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 DEFB127Q9H1M4 99 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 KLHL28Q9NXS3 571 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 C6orf203Q9P0P8 240 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 TNFRSF10DQ9UBN6 386 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 BOKQ9UMX3 212 aaPredicted RBP8.89□□□□□ -0.99
SF3A1-207ENST00000471342 ZFYVE26Q68DK2 2539 aa8.89□□□□□ -0.99
SF3A1-207ENST00000471342 LIPT2A6NK58 231 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 TNFRSF11BO00300 401 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 SUSD5O60279 629 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 GMNNO75496 209 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 C1QL1O75973 258 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 LDLRP01130 860 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 CPN1P15169 458 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 ITGA2P17301 1181 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 HOXB6P17509 224 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 TCEA1P23193 301 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 CHMP24386 653 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 APOBEC1P41238 236 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 RBM34P42696 430 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 CLK3P49761 638 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 POLR2HP52434 150 aaKnown RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 RAC1P63000 192 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 SLC34A1Q06495 639 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 ST3GAL3Q11203 375 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 MERTKQ12866 999 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 INAQ16352 499 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF74Q16587 644 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 PLXDC2Q6UX71 529 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 THSD4Q6ZMP0 1018 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 RANBP3LQ86VV4 465 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 NRMQ8IXM6 262 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 OR4K17Q8NGC6 315 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 OR6S1Q8NH40 331 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 NEIL3Q8TAT5 605 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 JSRP1Q96MG2 331 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-207ENST00000471342 MBOAT4Q96T53 435 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 FEVQ99581 238 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 DGCR6LQ9BY27 220 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 POTEKPQ9BYX7 375 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM27Q9HBJ8 222 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 MCCC2Q9HCC0 563 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 FANCFQ9NPI8 374 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 TAS2R5Q9NYW4 299 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 USE1Q9NZ43 259 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 B3GAT1Q9P2W7 334 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 CHRNA9Q9UGM1 479 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF835Q9Y2P0 537 aa8.88□□□□□ -0.99
SF3A1-207ENST00000471342 A0A1W2PNR3 127 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 MS4A18H0YCH9 400 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 DEAF1O75398 565 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 RASAL1O95294 804 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 HPRP00739 348 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 GP1BBP13224 206 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 GDF1P27539 372 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 ELK4P28324 431 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 UQCRC1P31930 480 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 CCR4P51679 360 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 AGFG1P52594 562 aaKnown RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 TAS2R41P59536 307 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SPIBQ01892 262 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 MYBPHQ13203 477 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SLC10A1Q14973 349 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 GUSBP1Q15486 140 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 BCL2A1Q16548 175 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 MS4A18Q3C1V0 323 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 RTL6Q6ICC9 239 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 LAIR2Q6ISS4 152 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 RNF113BQ8IZP6 322 aaKnown RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 CISD2Q8N5K1 135 aaKnown RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 TMCO5AQ8N6Q1 288 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 RELTQ969Z4 430 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 CIB1Q99828 191 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 FNDC11Q9BVV2 318 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 PLA2G12AQ9BZM1 189 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SLC19A3Q9BZV2 496 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 PRDM14Q9GZV8 571 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 ARMC7Q9H6L4 198 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 ASF1BQ9NVP2 202 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SELENONQ9NZV5 590 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SIGLEC7Q9Y286 467 aa8.87□□□□□ -0.99
SF3A1-207ENST00000471342 SAMHD1Q9Y3Z3 626 aaKnown RBP8.87□□□□□ -0.99
SF3A1-207ENST00000471342 CACNA1BQ00975 2339 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 SAC3D1A6NKF1 404 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 ENO4A6NNW6 628 aa8.86□□□□□ -0.99
SF3A1-207ENST00000471342 A8MVM7 634 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms