RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 AGTR1P30556 359 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 SLC7A1P30825 629 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 ANXA11P50995 505 aaKnown RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 ADAM8P78325 824 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 SKP2Q13309 424 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 QPRTQ15274 297 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 TOMM34Q15785 309 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 EXOC3L2Q2M3D2 409 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 FAM174BQ3ZCQ3 159 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 LPCAT4Q643R3 524 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 C3orf33Q6P1S2 294 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 STAC2Q6ZMT1 411 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 FCRLAQ7L513 359 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 ANKRD46Q86W74 232 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 PACRGLQ8N7B6 248 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 GLB1L3Q8NCI6 653 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 PMM1Q92871 262 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 MARK4Q96L34 752 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 HOPXQ9BPY8 73 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 SLC35A5Q9BS91 424 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 AIG1Q9NVV5 245 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 KLHL13Q9P2N7 655 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 KCNE5Q9UJ90 142 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 MKLN1Q9UL63 735 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 CLEC4AQ9UMR7 237 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 LIPT1Q9Y234 373 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 WDR45Q9Y484 360 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 C2CD3Q4AC94 2353 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 SIAH2O43255 324 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 PGRP06401 933 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 YES1P07947 543 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 SHC1P29353 583 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 HOXC12P31275 282 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 CHI3L1P36222 383 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-211ENST00000471260 MAGEA8P43361 318 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 KHKP50053 298 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 CCR4P51679 360 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 NR1H2P55055 460 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 SHEQ5VZ18 495 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 TYW3Q6IPR3 259 aaKnown RBP12.03□□□□□ -0.48
HMGN1-211ENST00000471260 TNFAIP8L2Q6P589 184 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF550Q7Z398 422 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 LRRC75A-AS1Q8N1F1 130 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF619Q8N2I2 560 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 FAM71CQ8NEG0 241 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 SLC25A43Q8WUT9 341 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ROBO4Q8WZ75 1007 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 PIK3IP1Q96FE7 263 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 THUMPD3Q9BV44 507 aaKnown RBP12.03□□□□□ -0.48
HMGN1-211ENST00000471260 SRXN1Q9BYN0 137 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ACER3Q9NUN7 267 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 TMEM181Q9P2C4 612 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 KLHL9Q9P2J3 617 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 ABCD2Q9UBJ2 740 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 CD300AQ9UGN4 299 aa12.03□□□□□ -0.48
HMGN1-211ENST00000471260 AQP12BA6NM10 295 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 IL6P05231 212 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ALDOCP09972 364 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 FCGR1AP12314 374 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 HSD17B1P14061 328 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 IDO1P14902 403 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 RPL5P46777 297 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 UFM1P61960 85 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 HPCAP84074 193 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ACKR1Q16570 336 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 NDUFAF6Q330K2 333 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 TIGD2Q4W5G0 525 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 AGKQ53H12 422 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 RNF220Q5VTB9 566 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 AQP12AQ8IXF9 295 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 CMIPQ8IY22 773 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 MIER2Q8N344 545 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 STEAP2Q8NFT2 490 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ZC3HAV1LQ96H79 300 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 TEX37Q96LM6 180 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 TRNT1Q96Q11 434 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 OR52E6Q96RD3 313 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 PANX1Q96RD7 426 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 BCO1Q9HAY6 547 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 EXOSC3Q9NQT5 275 aaKnown RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ARMC1Q9NVT9 282 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 GID8Q9NWU2 228 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms