RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 IDH3BO43837 385 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 FZD7O75084 574 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 THY1P04216 161 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 GKN3PP0CG01 181 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 SMIM18P0DKX4 95 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 NPIPA8P0DM63 369 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
PTPRE-207ENST00000471218 GABRB1P18505 474 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 IL5RAQ01344 420 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 TMED1Q13445 227 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 TUBA3CQ13748 450 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 MFSD13AQ14CX5 517 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 CD226Q15762 336 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 OCLNQ16625 522 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 EIF2S3LQ2VIR3 472 aaKnown RBP8.33□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF791Q3KP31 576 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-207ENST00000471218 SLC25A53Q5H9E4 307 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 RNLSQ5VYX0 342 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 SLC30A6Q6NXT4 461 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 SHISA6Q6ZSJ9 500 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 GRINAQ7Z429 371 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 NKAIN4Q8IVV8 208 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 NRMQ8IXM6 262 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 CYP4Z2PQ8N1L4 340 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 OR2T33Q8NG76 320 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 OR52L1Q8NGH7 329 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 B4GALNT2Q8NHY0 566 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 FAM81AQ8TBF8 368 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 FCGR1BQ92637 280 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 BPIFA2Q96DR5 249 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 RASL10BQ96S79 203 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 FN3KQ9H479 309 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 FLRT3Q9NZU0 649 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 CNIH4Q9P003 139 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 B3GNT3Q9Y2A9 372 aa8.33□□□□□ -1.08
PTPRE-207ENST00000471218 IGHV3-20A0A0C4DH32 117 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 UNC119BA6NIH7 251 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 H3BN98 237 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF701M0R085 212 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 HCRTR2O43614 444 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 MT-ATP6P00846 226 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 PDGFAP04085 211 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 TP53P04637 393 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 JUNBP17275 347 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 BMP7P18075 431 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ADH6P28332 368 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 GRK5P34947 590 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 POLR2IP36954 125 aaKnown RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 PCYT1AP49585 367 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SSR4P51571 173 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 POLR2HP52434 150 aaKnown RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 GAS1P54826 345 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SOX8P57073 446 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 MLF1P58340 268 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 PRPS1P60891 318 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SLC35A2P78381 396 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 EFNB1P98172 346 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 IL1RL1Q01638 556 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF117Q03924 483 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ARMC4Q5T2S8 1044 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SLC6A19Q695T7 634 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 FAM199XQ6PEV8 388 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SMARCD3Q6STE5 483 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 IGFL3Q6UXB1 125 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 APOOLQ6UXV4 268 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 RTL4Q6ZR62 310 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 PRSS48Q7RTY5 328 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 RPS19BP1Q86WX3 136 aaKnown RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 CCDC71Q8IV32 467 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ENTHD1Q8IYW4 607 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ALDH16A1Q8IZ83 802 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ZADH2Q8N4Q0 377 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 FDCSPQ8NFU4 85 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 PAQR8Q8TEZ7 354 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 TMEM255BQ8WV15 326 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 RFKQ969G6 155 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 MYDGFQ969H8 173 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 C8orf44Q96CB5 159 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 LMF1Q96S06 567 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 GPX7Q96SL4 187 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 AKIRIN1Q9H9L7 192 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SH2D2AQ9NP31 389 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 CLN6Q9NWW5 311 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 MED13Q9UHV7 2174 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 CCDC88CQ9P219 2028 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
PTPRE-207ENST00000471218 POLEQ07864 2286 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms