RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PIK3IP1Q96FE7 263 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 RSRC1Q96IZ7 334 aaKnown RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 MED18Q9BUE0 208 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 HOXD1Q9GZZ0 328 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 MTHFD2LQ9H903 347 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 UBTD1Q9HAC8 227 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 DCAF13Q9NV06 445 aaKnown RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 ADPRHL2Q9NX46 363 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 DKKL1Q9UK85 242 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 GPC6Q9Y625 555 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 HIVEP2P31629 2446 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 TCRBV5S2A0A599 114 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 INAFM1C9JVW0 142 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 SMAD7O15105 426 aaKnown RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 FCMRO60667 390 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 TMCC2O75069 709 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 GCM2O75603 506 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 MFN2O95140 757 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 IGKV1D-16P01601 117 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 GPIP06744 558 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 THBS1P07996 1170 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 POU2F1P14859 743 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 IL12BP29460 328 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 PNLIPRP2P54317 469 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 DSCR4P56555 118 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CLDN15P56746 228 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ELF3P78545 371 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 PPP2R2BQ00005 443 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CHRNEQ04844 493 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 FGFBP1Q14512 234 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 GUSBP1Q15486 140 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ZSWIM7Q19AV6 140 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CYBRD1Q53TN4 286 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CCNJQ5T5M9 372 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ZFP1Q6P2D0 407 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CBLL1Q75N03 491 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 EIF3MQ7L2H7 374 aaKnown RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CHMP1BQ7LBR1 199 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CXXC5Q7LFL8 322 aaKnown RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 P4HA3Q7Z4N8 544 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 BTLAQ7Z6A9 289 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ARMC8Q8IUR7 673 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 MEIOBQ8N635 442 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CNEP1R1Q8N9A8 125 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 FADS6Q8N9I5 356 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 LZICQ8WZA0 190 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 STMN2Q93045 179 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 TAMM41Q96BW9 452 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 PERPQ96FX8 193 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 DUS3LQ96G46 650 aaKnown RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 MS4A3Q96HJ5 214 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF845Q96IR2 970 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 HS3ST6Q96QI5 342 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ADOQ96SZ5 270 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 OPN3Q9H1Y3 402 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-206ENST00000471037 MAGIXQ9H6Y5 334 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 RNF122Q9H9V4 155 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 MKLN1Q9UL63 735 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 IFT52Q9Y366 437 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF175Q9Y473 711 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 ARID1AO14497 2285 aa8.13□□□□□ -1.11
SF3A1-206ENST00000471037 CSPG4Q6UVK1 2322 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 DHRS12A0PJE2 317 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 AGAP5A6NIR3 686 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 NPIPB9F8W1W9 429 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 C16orf97H3BN30 126 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 HAX1O00165 279 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 FKBP6O75344 327 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ENTPD5O75356 428 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 CNOT4O95628 575 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF682O95780 498 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 DBIP07108 87 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 NGFRP08138 427 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PABPC4LP0CB38 370 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 RPS4Y1P22090 263 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PSMA4P25789 261 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PRKAR1BP31321 381 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 RFX3P48380 749 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PTH2RP49190 550 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 CRYBA2P53672 197 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ATP12AP54707 1039 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 SELENOWP63302 87 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 GANABQ14697 944 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 LARS2Q15031 903 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 GPR68Q15743 365 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF141Q15928 474 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 LIN52Q52LA3 116 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 FAM98BQ52LJ0 330 aaKnown RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 OR5M10Q6IEU7 315 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 DHRS4L2Q6PKH6 230 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 OLIG3Q7RTU3 272 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 GALNT10Q86SR1 603 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 UBQLNLQ8IYU4 475 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF527Q8NB42 609 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 OR4K17Q8NGC6 315 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 OR52P1PQ8NH57 321 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 EFHD2Q96C19 240 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PYURFQ96I23 114 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms