RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 BFARQ9NZS9 450 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 TMEM216Q9P0N5 145 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 KLHL8Q9P2G9 620 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 ZNF580Q9UK33 172 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 POMT2Q9UKY4 750 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 ERGIC3Q9Y282 383 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 NDUFAF1Q9Y375 327 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 RNF11Q9Y3C5 154 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 FAM32AQ9Y421 112 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 U3KQV3 271 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 CNTNAP1P78357 1384 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 COL4A4P53420 1690 aaPredicted RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 BRCA1P38398 1863 aaKnown RBP4.6□□□□□ -1.67
RBM39-227ENST00000470563 GREB1Q4ZG55 1949 aa4.6□□□□□ -1.67
RBM39-227ENST00000470563 LOC105371242A0A075B767 164 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 IGHV3-20A0A0C4DH32 117 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 LOC100653049A0A140TA62 436 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 ISPDA4D126 451 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 NPIPB9F8W1W9 429 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 G3V2L1 256 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 H3BMQ9 156 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 LSM1O15116 133 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 SOCS5O75159 536 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SUPT3HO75486 399 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SULT1C4O75897 302 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 KRT34O76011 436 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CLPXO76031 633 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 AP2A1O95782 977 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 HPRP00739 348 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 NPPAP01160 153 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 KRT6BP04259 564 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 POLR2EP19388 210 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 GPX3P22352 226 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 FASP25445 335 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CAPGP40121 348 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SLC26A3P40879 764 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SERPINB10P48595 397 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 KRT6CP48668 564 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PITPNBP48739 271 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 RPL34P49207 117 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 SLC26A2P50443 739 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 HSPA2P54652 639 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PLOD1Q02809 727 aaPredicted RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 RIPPLY1Q0D2K3 151 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 MN1Q10571 1320 aaPredicted RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 MERTKQ12866 999 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PDZK1IP1Q13113 114 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 HNRNPA0Q13151 305 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 SCGB2A2Q13296 93 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 IL18R1Q13478 541 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 KRR1Q13601 381 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 ATP6AP1Q15904 470 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 HSDL1Q3SXM5 330 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SLC36A3Q495N2 470 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 UNC5DQ6UXZ4 953 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 WDR88Q6ZMY6 472 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 FRRS1Q6ZNA5 592 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 ZER1Q7Z7L7 766 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 LINC00523Q86TU6 105 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 UNC93AQ86WB7 457 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 DHFR2Q86XF0 187 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CLVS1Q8IUQ0 354 aaPredicted RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 SLC22A9Q8IVM8 553 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 KLHDC8BQ8IXV7 354 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 TBC1D21Q8IYX1 336 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CENPSQ8N2Z9 138 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 DHRSXQ8N5I4 330 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 OR13F1Q8NGS4 319 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 OR4L1Q8NH43 312 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 ACER1Q8TDN7 264 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 RXFP2Q8WXD0 754 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 ARNTL2Q8WYA1 636 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 VPS39Q96JC1 886 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CAPNS2Q96L46 248 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 NECTIN4Q96NY8 510 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 AGAP3Q96P47 875 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 TAAR1Q96RJ0 339 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PEBP4Q96S96 227 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 GPA33Q99795 319 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 WRAP53Q9BUR4 548 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 RBM4Q9BWF3 364 aaKnown RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 OSBPL10Q9BXB5 764 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SIRPDQ9H106 197 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 COQ10BQ9H8M1 238 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 MEAF6Q9HAF1 191 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CXorf21Q9HAI6 301 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SDF2L1Q9HCN8 221 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 C20orf96Q9NUD7 363 aaPredicted RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 MED17Q9NVC6 651 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SMPD3Q9NY59 655 aaPredicted RBP4.59□□□□□ -1.67
RBM39-227ENST00000470563 ADA2Q9NZK5 511 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 ABCD2Q9UBJ2 740 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 CD300AQ9UGN4 299 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 PCSK1NQ9UHG2 260 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 AP3M1Q9Y2T2 418 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 OR1A2Q9Y585 309 aa4.59□□□□□ -1.67
RBM39-227ENST00000470563 SCN1AP35498 2009 aa4.58□□□□□ -1.68
RBM39-227ENST00000470563 A0A0U1RRA0 63 aa4.58□□□□□ -1.68
RBM39-227ENST00000470563 MPTX1A8MV57 137 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms