RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 GSC2O15499 205 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 LRRTM2O43300 516 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 DNPH1O43598 174 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CHP2O43745 196 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 IFNW1P05000 195 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 PRF1P14222 555 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 TNFRSF1BP20333 461 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CXCR1P25024 350 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 SLC7A1P30825 629 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 SFTPDP35247 375 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 TPD52P55327 224 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 ENTPD8Q5MY95 495 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 PDSS1Q5T2R2 415 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 POMZP3Q6PJE2 187 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 C5orf46Q6UWT4 87 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR10D3Q8NH80 312 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 MBD3L2Q8NHZ7 208 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 ADAMTS16Q8TE57 1224 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CCDC124Q96CT7 223 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 DDIT4LQ96D03 193 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 SLC47A1Q96FL8 570 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLPTM1LQ96KA5 538 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 TTYH2Q9BSA4 534 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLCF1Q9UBD9 225 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 SH3BGRL2Q9UJC5 107 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 KIAA1549Q9HCM3 1950 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A087WUJ7 227 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMEM72A0PK05 275 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TRAPPC13A5PLN9 417 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 A8MVM7 634 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 ACOT8O14734 319 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TNFSF11O14788 317 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 NPIPB7O75200 414 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR5F1O95221 314 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 SEMG1P04279 462 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 THRBP10828 461 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 FCGR2AP12318 317 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TIMP3P35625 211 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR1E2P47887 323 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 CDH12P55289 794 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMEM176BQ3YBM2 270 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 HBMQ6B0K9 141 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMEM211Q6ICI0 200 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 RPTNQ6XPR3 784 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 C3P1Q6ZMU1 363 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 SEM1Q6ZVN7 128 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 FJX1Q86VR8 437 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 DHFR2Q86XF0 187 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 MARVELD2Q8N4S9 558 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 FAM86B1Q8N7N1 296 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR10Q1Q8NGQ4 319 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 STK35Q8TDR2 534 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 WNT2BQ93097 391 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 CPNE4Q96A23 557 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 PRRC1Q96M27 445 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 POTEKPQ9BYX7 375 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 TIGARQ9NQ88 270 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 ALKBH4Q9NXW9 302 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
CDC42SE1-203ENST00000470278 C2CD3Q4AC94 2353 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 SETD2Q9BYW2 2564 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 SLC22A20A6NK97 555 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 FZD7O75084 574 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 PRKD3O94806 890 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 PMS2P2O95744 297 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 THY1P04216 161 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 GLI4P10075 376 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 EIF1AXP47813 144 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 PER3P56645 1201 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 RAC3P60763 192 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 MS4A2Q01362 244 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 GABPB1Q06547 395 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 MYBPHQ13203 477 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 RIPPLY2Q5TAB7 128 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 LINC00114Q6XXX2 140 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 TMPPEQ6ZT21 453 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 RPRMLQ8N4K4 120 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 ELOA3Q8NG57 546 aa13.39□□□□□ -0.27
CDC42SE1-203ENST00000470278 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms