RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HINT3Q9NQE9 182 aaKnown RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 MED11Q9P086 117 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 PPP4R1LQ9P1A2 415 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 SNTNA6NMZ2 147 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 NDUFB2O95178 105 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 ADORA3P0DMS8 318 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 F8A1P23610 371 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 POLR2HP52434 150 aaKnown RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 CDH11P55287 796 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 IRF3Q14653 427 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 ZNF791Q3KP31 576 aaPredicted RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 AADACL4Q5VUY2 407 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 UBE2UQ5VVX9 321 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 IL20RBQ6UXL0 311 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 CXXC5Q7LFL8 322 aaKnown RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 CPOQ8IVL8 374 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 BBS1Q8NFJ9 593 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 ZNF420Q8TAQ5 688 aaPredicted RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 KTI12Q96EK9 354 aaPredicted RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 TMEM80Q96HE8 168 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 MOGAT1Q96PD6 335 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 TSC22D3Q99576 134 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 CDCA4Q9BXL8 241 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 CDCP1Q9H5V8 836 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 FBXL4Q9UKA2 621 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 ANKUB1A6NFN9 424 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 NOL3O60936 208 aaKnown RBP16.48■□□□□ 0.23
SMC4-211ENST00000469858 SLC25A12O75746 678 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 APOL3O95236 402 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 PTHP01270 115 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 IGF2P01344 180 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 NOS3P29474 1203 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 PTGDSP41222 190 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 B3GNT6Q6ZMB0 384 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 GRINAQ7Z429 371 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 ASB15Q8WXK1 588 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 RFKQ969G6 155 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 RNFT2Q96EX2 444 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 DNAJA3Q96EY1 480 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 FUNDC2Q9BWH2 189 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 NANSQ9NR45 359 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 CMC2Q9NRP2 79 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 BAIAP2Q9UQB8 552 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 YARS2Q9Y2Z4 477 aaKnown RBP16.48■□□□□ 0.23
SMC4-211ENST00000469858 HRH3Q9Y5N1 445 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 WIF1Q9Y5W5 379 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 PCSK5Q92824 1860 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 AHCTF1Q8WYP5 2266 aa16.48■□□□□ 0.23
SMC4-211ENST00000469858 TMED7-TICAM2A0A0A6YYA0 188 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 HTR3EA5X5Y0 456 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 VGLL3A8MV65 326 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 MCIDASD6RGH6 385 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 ZNF701M0R085 212 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 FOXD2O60548 495 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 RAD1O60671 282 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 RPL4P36578 427 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 RPS5P46782 204 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 MTNR1AP48039 350 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 SUMO3P55854 103 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 NXNL2Q5VZ03 156 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 PLBD1Q6P4A8 553 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 OPN5Q6U736 354 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 RPS19BP1Q86WX3 136 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 SLC43A2Q8N370 569 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 OR52I1Q8NGK6 324 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 C9orf43Q8TAL5 461 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 TMEM234Q8WY98 164 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 NACC2Q96BF6 587 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 ERMAPQ96PL5 475 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 TAPBPLQ9BX59 468 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 MED20Q9H944 212 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 TMED7Q9Y3B3 224 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 ZC3H12DA2A288 527 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 H3BMQ9 156 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 TP53I11O14683 189 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 SUSD5O60279 629 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 TRMUO75648 421 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 HPP00738 406 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 ACVR2AP27037 513 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 CASP3P42574 277 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 SSR4P51571 173 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 RPS4XP62701 263 aaKnown RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 IL10RAQ13651 578 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 TMEM44Q2T9K0 475 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 TAAR8Q969N4 342 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 LGALS12Q96DT0 336 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 COG8Q96MW5 612 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 FN3KQ9H479 309 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 SDHAF3Q9NRP4 125 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 P4HTMQ9NXG6 502 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 PTTG2Q9NZH5 202 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 H2AFY2Q9P0M6 372 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
SMC4-211ENST00000469858 CHCHD2Q9Y6H1 151 aaPredicted RBP16.47■□□□□ 0.23
SMC4-211ENST00000469858 TMEM72A0PK05 275 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 RIIAD1A6NNX1 92 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 C21orf140B9A014 251 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 BLOC1S5-TXNDC5H3BN57 136 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 PEPDP12955 493 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms