RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MT-ATP6P00846 226 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 IFI30P13284 250 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 CHMP24386 653 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 DPP4P27487 766 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ELK4P28324 431 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 GIPRP48546 466 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 MASP1P48740 699 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 TMPRSS3P57727 454 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ISL1P61371 349 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 CDK5Q00535 292 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 FHL1Q13642 323 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 MFSD13AQ14CX5 517 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 PTGES3Q15185 160 aaKnown RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 INPP5JQ15735 1006 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 LINC00696Q6ZRV3 163 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ZFP62Q8NB50 900 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 OR2M7Q8NG81 312 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 SLC25A43Q8WUT9 341 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 OSTF1Q92882 214 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 SGTBQ96EQ0 304 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 GNRHR2Q96P88 292 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 NR1H4Q96RI1 486 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 UBL7Q96S82 380 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 OR2B2Q9GZK3 357 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 C20orf141Q9NUB4 165 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ANKRD10Q9NXR5 420 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 BOKQ9UMX3 212 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-208ENST00000469529 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 HRH3Q9Y5N1 445 aa11.54□□□□□ -0.56
TRAF4-208ENST00000469529 ZFHX4Q86UP3 3567 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 UNC119BA6NIH7 251 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 A6NL46 340 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 EFCAB9A8MZ26 197 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 CDC42EP2O14613 210 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 GNB5O14775 395 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SUSD5O60279 629 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 OR7A10O76100 309 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 HPNP05981 417 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ASAH2BP0C7U1 165 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 POU2F1P14859 743 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 FUT1P19526 365 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 MAKP20794 623 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 GGT2P36268 569 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 DNASE1L1P49184 302 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 EFNB1P98172 346 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TEKQ02763 1124 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF74Q16587 644 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZIK1Q3SY52 487 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SLC25A30Q5SVS4 291 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF691Q5VV52 312 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SLX4IPQ5VYV7 408 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SULF2Q8IWU5 870 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TMEM178AQ8NBL3 297 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 PFN4Q8NHR9 129 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TM9SF4Q92544 642 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 FAM46AQ96IP4 442 aaKnown RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 MUS81Q96NY9 551 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 BBC3Q96PG8 261 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 YTHDF1Q9BYJ9 559 aaKnown RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SLC25A19Q9HC21 320 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TUBA8Q9NY65 449 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TRAPPC4Q9Y296 219 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 ZNF337Q9Y3M9 751 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 SPIN1Q9Y657 262 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-208ENST00000469529 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
TRAF4-208ENST00000469529 TRAV17A0A0B4J275 112 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 TMEM72A0PK05 275 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 EIF4E1BA6NMX2 242 aaKnown RBP11.52□□□□□ -0.57
TRAF4-208ENST00000469529 FTCDNL1E5RQL4 147 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 MPZL2O60487 215 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 HCN1O60741 890 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 ITGB2P05107 769 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 EPHA2P29317 976 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 PRPS1P60891 318 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 CXCR4P61073 352 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 RPS4XP62701 263 aaKnown RBP11.52□□□□□ -0.57
TRAF4-208ENST00000469529 ARG2P78540 354 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 CRYZQ08257 329 aaKnown RBP11.52□□□□□ -0.57
TRAF4-208ENST00000469529 SELENBP1Q13228 472 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 ZNF239Q16600 458 aaKnown RBP11.52□□□□□ -0.57
TRAF4-208ENST00000469529 ZBED5Q49AG3 693 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 FAM69AQ5T7M9 428 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 C1orf140Q5VVS0 124 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 ZNF620Q6ZNG0 422 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.57
TRAF4-208ENST00000469529 THAP5Q7Z6K1 395 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms