RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ZNF716A6NP11 495 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 MRPL33O75394 65 aaKnown RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 ETFAP13804 333 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 MAGEA8P43361 318 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 CLK1P49759 484 aaKnown RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 SLC18A1P54219 525 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 PDK3Q15120 406 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 GSTA3Q16772 222 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 ZNF672Q499Z4 452 aaPredicted RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 C6orf10Q5SRN2 563 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 FBXW9Q5XUX1 488 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 MAVSQ7Z434 540 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 SMAP2Q8WU79 429 aaPredicted RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 MAELQ96JY0 434 aaKnown RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 OR52B2Q96RD2 323 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 RMND5AQ9H871 391 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 TMBIM4Q9HC24 238 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 ZNF701Q9NV72 531 aaPredicted RBP19.24■□□□□ 0.67
TTC28-204ENST00000468807 RLIMQ9NVW2 624 aa19.24■□□□□ 0.67
TTC28-204ENST00000468807 A0A1W2PP18 115 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 GPR171O14626 319 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 UBDO15205 165 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 DNPH1O43598 174 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 RAMP1O60894 148 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 TMCC2O75069 709 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 BCHEP06276 602 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 COX5AP20674 150 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 RPS4Y1P22090 263 aaKnown RBP19.23■□□□□ 0.67
TTC28-204ENST00000468807 SLC1A3P43003 542 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 SLC35A1P78382 337 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 FAPQ12884 760 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 GTDC1Q4AE62 458 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 TIMM23BQ5SRD1 257 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 CASP12Q6UXS9 341 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 VRK2Q86Y07 508 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 ZNF433Q8N7K0 673 aaPredicted RBP19.23■□□□□ 0.67
TTC28-204ENST00000468807 OR9I1Q8NGQ6 314 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 TLCD1Q96CP7 247 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 ITCHQ96J02 903 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 NAA11Q9BSU3 229 aaPredicted RBP19.23■□□□□ 0.67
TTC28-204ENST00000468807 ZIM2Q9NZV7 527 aa19.23■□□□□ 0.67
TTC28-204ENST00000468807 SOD3P08294 240 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 GKN3PP0CG01 181 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 PAX1P15863 534 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 CDKN1AP38936 164 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 POLR2JP52435 117 aaKnown RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 CRISP3P54108 245 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 DSTNP60981 165 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 EPS8Q12929 822 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 LIN52Q52LA3 116 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 SEZ6L2Q6UXD5 910 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 MIER2Q8N344 545 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 CADM2Q8N3J6 435 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 OR52N5Q8NH56 324 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 OR52P1PQ8NH57 321 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 PMM1Q92871 262 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 VPS33AQ96AX1 596 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 TRMT61AQ96FX7 289 aaKnown RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 AURKBQ96GD4 344 aaPredicted RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 TPT1P8Q9HAU6 139 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 CACYBPQ9HB71 228 aaKnown RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 SDR39U1Q9NRG7 319 aaPredicted RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 ASB6Q9NWX5 421 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 CALML5Q9NZT1 146 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 TRAPPC4Q9Y296 219 aa19.22■□□□□ 0.67
TTC28-204ENST00000468807 MAGED1Q9Y5V3 778 aaPredicted RBP19.22■□□□□ 0.67
TTC28-204ENST00000468807 ZC3H12DA2A288 527 aaKnown RBP19.21■□□□□ 0.67
TTC28-204ENST00000468807 TMEM247A6NEH6 219 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 OR5H1A6NKK0 313 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 ABCD4O14678 606 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 ZNF208O43345 1280 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 EIF1BO60739 113 aaKnown RBP19.21■□□□□ 0.67
TTC28-204ENST00000468807 IMPDH2P12268 514 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 CXCR1P25024 350 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 RPS26P11Q5JNZ5 115 aaPredicted RBP19.21■□□□□ 0.67
TTC28-204ENST00000468807 ZNF836Q6ZNA1 936 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 P2RY8Q86VZ1 359 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 ZNF440Q8IYI8 595 aa19.21■□□□□ 0.67
TTC28-204ENST00000468807 CSPG4Q6UVK1 2322 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 A0A1W2PR80 420 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 CDHR4A6H8M9 788 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 DANCRP0C864 163 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 PCSK6P29122 969 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 NTF4P34130 210 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 MVDP53602 400 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 SLC16A1P53985 500 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 CDH11P55287 796 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 COPZ1P61923 177 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 VEZF1Q14119 521 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 MAPK11Q15759 364 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 BEND6Q5SZJ8 279 aaPredicted RBP19.2■□□□□ 0.66
TTC28-204ENST00000468807 C9orf135Q5VTT2 229 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
TTC28-204ENST00000468807 OR52E4Q8NGH9 312 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 SLC38A5Q8WUX1 472 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 TMEM19Q96HH6 336 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 TRIM2Q9C040 744 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 ALG2Q9H553 416 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 CISD1Q9NZ45 108 aaKnown RBP19.2■□□□□ 0.66
TTC28-204ENST00000468807 NPAP1Q9NZP6 1156 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms