RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 C17orf64Q86WR6 236 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ARL14Q8N4G2 192 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 NECAB1Q8N987 351 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ZNF721Q8TF20 911 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 DDI1Q8WTU0 396 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 GTSF1Q8WW33 167 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 GLYATL1Q969I3 302 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SLCO4A1Q96BD0 722 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 MRPL53Q96EL3 112 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 EEF2KMTQ96G04 330 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 HPDLQ96IR7 371 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CXorf58Q96LI9 332 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SPATA13Q96N96 652 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 OMDQ99983 421 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 MRPL45Q9BRJ2 306 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 MED10Q9BTT4 135 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ELOVL4Q9GZR5 314 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 WWP1Q9H0M0 922 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CXXC4Q9H2H0 198 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 DCLRE1BQ9H816 532 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SGK2Q9HBY8 427 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ZNF446Q9NWS9 450 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 FBXL12Q9NXK8 326 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 RBAKQ9NYW8 714 aaPredicted RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 RSPH14Q9UHP6 348 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 PTPRQQ9UMZ3 2332 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 FLNCQ14315 2725 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CHD5Q8TDI0 1954 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CSMD2Q7Z408 3487 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ATP8B3O60423 1300 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 GOLGA8IPA6NC78 632 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 GOLGA8JA6NMD2 632 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 YJEFN3A6XGL0 299 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 A8MXQ7 604 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 MCF2LO15068 1137 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 KIAA0513O60268 411 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 JAK2O60674 1132 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 PFKFB2O60825 505 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 REC8O95072 547 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TNNC2P02585 160 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 MT-ND3P03897 115 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 GP1BAP07359 652 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ABHD2P08910 425 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 CCDC159P0C7I6 412 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TPBGLP0DKB5 382 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ALPPL2P10696 532 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 AREGP15514 252 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 WARSP23381 471 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 FASP25445 335 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 MAT2AP31153 395 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 NSFP46459 744 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 DUSP3P51452 185 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 SLC12A3P55017 1021 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 RPL27P61353 136 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 TNNC1P63316 161 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 GTF2BQ00403 316 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 HSPA14Q0VDF9 509 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SRSF6Q13247 344 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 ORC2Q13416 577 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 TGIF1Q15583 401 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 IL17AQ16552 155 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 CDKN3Q16667 212 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ISXQ2M1V0 245 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 C10orf120Q5SQS8 335 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TMEM215Q68D42 235 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 CGB2Q6NT52 195 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SLC22A18ASQ8N1D0 253 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SLC25A45Q8N413 288 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ZNF491Q8N8L2 437 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 OR2T34Q8NGX1 318 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 OR4C6Q8NH72 309 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ZNF564Q8TBZ8 553 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 MRPL24Q96A35 216 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 ZBED6CLQ96FA7 236 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 DTD2Q96FN9 168 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SMARCD1Q96GM5 515 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 RBM18Q96H35 190 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 ANKRD36BP1Q96IX9 119 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 PIWIL1Q96J94 861 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 C8orf76Q96K31 380 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 RAB40CQ96S21 281 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 NAP1L3Q99457 506 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 RTBDNQ9BSG5 229 aaPredicted RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 FUNDC2Q9BWH2 189 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 NEUROG2Q9H2A3 272 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SLC26A1Q9H2B4 701 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 GANQ9H2C0 597 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TMEM245Q9H330 911 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 FBXO44Q9H4M3 255 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 THAP9Q9H5L6 903 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 SYNDIG1Q9H7V2 258 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 PARVGQ9HBI0 331 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 PRSS16Q9NQE7 514 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 PIGVQ9NUD9 493 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 ACOXLQ9NUZ1 547 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TECRQ9NZ01 308 aaKnown RBP2.42□□□□□ -2.02
XRN1-206ENST00000467077 FETUBQ9UGM5 382 aa2.42□□□□□ -2.02
XRN1-206ENST00000467077 TRMT6Q9UJA5 497 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms