RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 VPS33AQ96AX1 596 aa22.18■■□□□ 1.14
SDF2L1-202ENST00000466935 ATP6V1G3Q96LB4 118 aa22.18■■□□□ 1.14
SDF2L1-202ENST00000466935 ADAM19Q9H013 955 aa22.18■■□□□ 1.14
SDF2L1-202ENST00000466935 TCF7L2Q9NQB0 619 aa22.18■■□□□ 1.14
SDF2L1-202ENST00000466935 RNF115Q9Y4L5 304 aa22.18■■□□□ 1.14
SDF2L1-202ENST00000466935 A0A0G2JPF8 293 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 HNRNPCL2B2RXH8 293 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 HNRNPCL3B7ZW38 293 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 POLR3GO15318 223 aaPredicted RBP22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 HNRNPCL1O60812 293 aaKnown RBP22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 HNRNPCL4P0DMR1 293 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 TACR3P29371 465 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 SLC35A1P78382 337 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 IRX1P78414 480 aaPredicted RBP22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 FADDQ13158 208 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 LARS2Q15031 903 aaKnown RBP22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 TSC22D1Q15714 1073 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 NCMAPQ5T1S8 102 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 ARMC7Q9H6L4 198 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 TMEM45AQ9NWC5 275 aa22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 NOSIPQ9Y314 301 aaKnown RBP22.17■■□□□ 1.14
SDF2L1-202ENST00000466935 PGM3O95394 542 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 PLAUP00749 431 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 BCHEP06276 602 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 BMP2P12643 396 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 OR2B6P58173 313 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 TIMM23BQ5SRD1 257 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 FBXW9Q5XUX1 488 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 SEZ6L2Q6UXD5 910 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 TMEM171Q8WVE6 324 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 APH1AQ96BI3 265 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 ZNF775Q96BV0 537 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 AURKBQ96GD4 344 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 CCDC28BQ9BUN5 200 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 CXorf56Q9H5V9 222 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 CACYBPQ9HB71 228 aaKnown RBP22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 ZNF232Q9UNY5 417 aa22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 ZNF443Q9Y2A4 671 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-202ENST00000466935 USF3Q68DE3 2245 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 A0A096LPI6 279 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 TMEM72A0PK05 275 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 LYZL6O75951 148 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 CD3EP07766 207 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 IGHV1-2P23083 117 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 EDNRAP25101 427 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 ACAA2P42765 397 aaKnown RBP22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 KRTAP21-3Q3LHN1 58 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 GTDC1Q4AE62 458 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 ZNF836Q6ZNA1 936 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 VRK2Q86Y07 508 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 AKAP1Q92667 903 aaKnown RBP eCLIP22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 SLC35B4Q969S0 331 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 MUCL1Q96DR8 90 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 TMEM19Q96HH6 336 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 NAA11Q9BSU3 229 aaPredicted RBP22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 PAIP1Q9H074 479 aaKnown RBP22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 BCL2L10Q9HD36 194 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 ZNF701Q9NV72 531 aaPredicted RBP22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 RLIMQ9NVW2 624 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 IFT52Q9Y366 437 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 PCDHB14Q9Y5E9 798 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 VPS13CQ709C8 3753 aa22.15■■□□□ 1.14
SDF2L1-202ENST00000466935 INHBBP09529 407 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 HOXB9P17482 250 aaPredicted RBP22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 GGT1P19440 569 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 PTH2RP49190 550 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 COPZ1P61923 177 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 CAPRIN1Q14444 709 aaKnown RBP22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 PPA1Q15181 289 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 RGNQ15493 299 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 WBP2NLQ6ICG8 309 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 PAQR6Q6TCH4 344 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 ZNF433Q8N7K0 673 aaPredicted RBP22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 GOLGA6L1Q8N7Z2 621 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 SPATA9Q9BWV2 254 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 A4GALTQ9NPC4 353 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 SLCO1B3Q9NPD5 702 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 MALT1Q9UDY8 824 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 SLC9A8Q9Y2E8 581 aa22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 NSD1Q96L73 2696 aaPredicted RBP22.14■■□□□ 1.13
SDF2L1-202ENST00000466935 FAM171A2A8MVW0 826 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 CLIC1O00299 241 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 MRPL33O75394 65 aaKnown RBP22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 IMPDH2P12268 514 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 CCNA2P20248 432 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 CXCR1P25024 350 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 IDH3AP50213 366 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 LRIF1Q5T3J3 769 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 ALKBH2Q6NS38 261 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 BLOC1S3Q6QNY0 202 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 YTHDF3Q7Z739 585 aaKnown RBP22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 STON2Q8WXE9 905 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 PERPQ96FX8 193 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 PIF1Q9H611 641 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 PARPBPQ9NWS1 579 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 GMEB1Q9Y692 573 aa22.13■■□□□ 1.13
SDF2L1-202ENST00000466935 NAV3Q8IVL0 2385 aa22.12■■□□□ 1.13
SDF2L1-202ENST00000466935 OR5H1A6NKK0 313 aa22.12■■□□□ 1.13
SDF2L1-202ENST00000466935 PPIBP23284 216 aaKnown RBP22.12■■□□□ 1.13
SDF2L1-202ENST00000466935 IDUAP35475 653 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms