RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 OSTF1Q92882 214 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 MAL2Q969L2 176 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 CPNE4Q96A23 557 aaPredicted RBP11.64□□□□□ -0.55
SRRT-207ENST00000466432 OR5B2Q96R09 309 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 MTHFD2LQ9H903 347 aaPredicted RBP11.64□□□□□ -0.55
SRRT-207ENST00000466432 TIGARQ9NQ88 270 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 EXOSC3Q9NQT5 275 aaKnown RBP11.64□□□□□ -0.55
SRRT-207ENST00000466432 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 ACER3Q9NUN7 267 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 TMEM45AQ9NWC5 275 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 THUMPD1Q9NXG2 353 aaKnown RBP11.64□□□□□ -0.55
SRRT-207ENST00000466432 VAPAQ9P0L0 249 aa11.64□□□□□ -0.55
SRRT-207ENST00000466432 DSPPQ9NZW4 1301 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 HIVEP2P31629 2446 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 A0A1W2PP18 115 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 ETV2O00321 342 aaPredicted RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 DNAJA2O60884 412 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 TFPTP0C1Z6 253 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 CCNA2P20248 432 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 PPIBP23284 216 aaKnown RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 ARFIP2P53365 341 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 PLAURQ03405 335 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 TNK1Q13470 666 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 LARS2Q15031 903 aaKnown RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 TSC22D1Q15714 1073 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 LIN52Q52LA3 116 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 NCMAPQ5T1S8 102 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 DNM1P46Q6ZS02 220 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 DHDDSQ86SQ9 333 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 MSRB3Q8IXL7 192 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 AKAP1Q92667 903 aaKnown RBP eCLIP11.63□□□□□ -0.55
SRRT-207ENST00000466432 S100PBPQ96BU1 408 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 ZNF385DQ9H6B1 395 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 LEF1Q9UJU2 399 aaPredicted RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 ZNF443Q9Y2A4 671 aaPredicted RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 NDUFAF1Q9Y375 327 aa11.63□□□□□ -0.55
SRRT-207ENST00000466432 SPIN1Q9Y657 262 aaPredicted RBP11.63□□□□□ -0.55
SRRT-207ENST00000466432 JMJD1CQ15652 2540 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 TRBV5-3A0A0A0MS03 114 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 EVPLLA8MZ36 301 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 ZNF814B7Z6K7 855 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
SRRT-207ENST00000466432 ADAM11O75078 769 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 SOD3P08294 240 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 PABPC4LP0CB38 370 aaKnown RBP11.62□□□□□ -0.55
SRRT-207ENST00000466432 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 EDNRAP25101 427 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 TAB1Q15750 504 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 SFRP5Q5T4F7 317 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 AP1ARQ63HQ0 302 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 FCRLAQ7L513 359 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 GRINAQ7Z429 371 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
SRRT-207ENST00000466432 TUSC5Q8IXB3 177 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 CADM2Q8N3J6 435 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 NFKBIDQ8NI38 313 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 BBS10Q8TAM1 723 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 SLC25A43Q8WUT9 341 aaPredicted RBP11.62□□□□□ -0.55
SRRT-207ENST00000466432 PMM1Q92871 262 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 GP6Q9HCN6 339 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 A4GALTQ9NPC4 353 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 SLC52A3Q9NQ40 469 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 CTPS2Q9NRF8 586 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 RLIMQ9NVW2 624 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 KLHL13Q9P2N7 655 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 CHRNA9Q9UGM1 479 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 CORO2BQ9UQ03 480 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 FBN3Q75N90 2809 aa11.62□□□□□ -0.55
SRRT-207ENST00000466432 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 CFAP73A6NFT4 308 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 ARAFP10398 606 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 BMP2P12643 396 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 APOBEC1P41238 236 aaKnown RBP11.61□□□□□ -0.55
SRRT-207ENST00000466432 ATP5J2P56134 94 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 EPS8Q12929 822 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 NFYCQ13952 458 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 PGGHGQ32M88 737 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 SYT14P1Q58G82 188 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 CGB2Q6NT52 195 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 STEAP2Q8NFT2 490 aa11.61□□□□□ -0.55
SRRT-207ENST00000466432 PSD2Q9BQI7 771 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms