RNA–Protein interactions for RNA: ENST00000466367.5

ARRDC1-205, Transcript of arrestin domain containing 1, humanhuman

TSL 1 (best)

Gene ARRDC1, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-205ENST00000466367 SHARPINQ9H0F6 387 aa18.5■□□□□ 0.55
ARRDC1-205ENST00000466367 SLC7A10Q9NS82 523 aa18.5■□□□□ 0.55
ARRDC1-205ENST00000466367 NOP53Q9NZM5 478 aaKnown RBP18.5■□□□□ 0.55
ARRDC1-205ENST00000466367 UPB1Q9UBR1 384 aa18.5■□□□□ 0.55
ARRDC1-205ENST00000466367 LPAR3Q9UBY5 353 aa18.5■□□□□ 0.55
ARRDC1-205ENST00000466367 MALRD1Q5VYJ5 2156 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 ATP6V1G2-DDX39BF2Z307 99 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 RNASET2O00584 256 aaKnown RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 CPSF4O95639 269 aaKnown RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 CSF3P09919 207 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 USF1P22415 310 aaPredicted RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 SERPINB5P36952 375 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 EFNA4P52798 201 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 SRSF2Q01130 221 aaKnown RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 EMX2Q04743 252 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 MAD2L1Q13257 205 aaPredicted RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 ARFGAP2Q8N6H7 521 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 EIF1ADQ8N9N8 165 aaKnown RBP18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 PROX1Q92786 737 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 FKRPQ9H9S5 495 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 SLC17A5Q9NRA2 495 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 TMEM181Q9P2C4 612 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 PCDHGB4Q9UN71 923 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 FLVCR1Q9Y5Y0 555 aa18.49■□□□□ 0.55
ARRDC1-205ENST00000466367 ARFGEF3Q5TH69 2177 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 AP3D1O14617 1153 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 LMX1BO60663 402 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 IDH2P48735 452 aaKnown RBP18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 LSM11P83369 360 aaKnown RBP eCLIP18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 CHRNB3Q05901 458 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 PDCD2Q16342 344 aaPredicted RBP18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 TSPO2Q5TGU0 170 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 IL17RELQ6ZVW7 336 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 CNOT9Q92600 299 aaKnown RBP18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 SAP130Q9H0E3 1048 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 CHODLQ9H9P2 273 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 POLE3Q9NRF9 147 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 ASIC5Q9NY37 505 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 DCTN4Q9UJW0 460 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 SLC9A8Q9Y2E8 581 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 AMDHD2Q9Y303 409 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 PMF1-BGLAPU3KQ54 211 aa18.48■□□□□ 0.55
ARRDC1-205ENST00000466367 TMED7-TICAM2A0A0A6YYA0 188 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 TMEM72A0PK05 275 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 AGR2O95994 175 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 IMPDH2P12268 514 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 UQCRC2P22695 453 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 IGFBP5P24593 272 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 APOBEC3AP31941 199 aaPredicted RBP18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 CLK1P49759 484 aaKnown RBP18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 KHKP50053 298 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 PHC1P78364 1004 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 KCNJ10P78508 379 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 HPCAP84074 193 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 H3F3AP84243 136 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 GGTLC2Q14390 218 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 GPAT3Q53EU6 434 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 SAXO2Q658L1 398 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 C17orf78Q8N4C9 275 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 C1orf162Q8NEQ5 155 aaPredicted RBP18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 OIT3Q8WWZ8 545 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 FBXO17Q96EF6 278 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 DPY30Q9C005 99 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 EXOSC3Q9NQT5 275 aaKnown RBP18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 MOKQ9UQ07 419 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 TRAPPC4Q9Y296 219 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 TMED7Q9Y3B3 224 aa18.47■□□□□ 0.55
ARRDC1-205ENST00000466367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.46■□□□□ 0.554e-8■■□□□ 11.9
ARRDC1-205ENST00000466367 PRAMEF27A3QJZ7 478 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 SCN2BO60939 215 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 C1QCP02747 245 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 BPGMP07738 259 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 BMP4P12644 408 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 CREB1P16220 341 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 FKBP2P26885 142 aaKnown RBP18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 SLC35A1P78382 337 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 RIBC1Q8N443 379 aaPredicted RBP18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 OR8J2Q8NGG1 315 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 SORCS2Q96PQ0 1159 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 PARPBPQ9NWS1 579 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 OSGIN1Q9UJX0 560 aa18.46■□□□□ 0.55
ARRDC1-205ENST00000466367 ZC3H12DA2A288 527 aaKnown RBP18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 SLC35F4A4IF30 521 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 GUSBP08236 651 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 SRD5A1P18405 259 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 TACR3P29371 465 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 CHI3L1P36222 383 aaPredicted RBP18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 GZMKP49863 264 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 POLR2HP52434 150 aaKnown RBP18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 SLC17A1Q14916 467 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 C3orf49Q96BT1 292 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 DDIT4LQ96D03 193 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 SLC35A5Q9BS91 424 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 NAA11Q9BSU3 229 aaPredicted RBP18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 C19orf24Q9BVV8 132 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 AKTIPQ9H8T0 292 aa18.45■□□□□ 0.54
ARRDC1-205ENST00000466367 MARCOQ9UEW3 520 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms