RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 C17orf47Q8NEP4 570 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 SETD6Q8TBK2 473 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 IL4I1Q96RQ9 567 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 ARHGDIGQ99819 225 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 RNF167Q9H6Y7 350 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 STUB1Q9UNE7 303 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 NPFFR2Q9Y5X5 522 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 PCSK5Q92824 1860 aa17.02■□□□□ 0.32
CAPN3-209ENST00000466222 A0A1W2PQ72 361 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 SNPHO15079 494 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 GPX5O75715 221 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 IGHEP01854 428 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 GSTM3P21266 225 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 IL12BP29460 328 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 ZNF91Q05481 1191 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 KLHL26Q53HC5 615 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 SOWAHCQ53LP3 525 aaPredicted RBP17.02■□□□□ 0.31
CAPN3-209ENST00000466222 AKAP14Q86UN6 197 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 SLC34A3Q8N130 599 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 NANOGP1Q8N7R0 232 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.31
CAPN3-209ENST00000466222 HTRA1Q92743 480 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 TP53INP1Q96A56 240 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 KLHDC3Q9BQ90 382 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 SLC30A2Q9BRI3 323 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 MMP25Q9NPA2 562 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 NDUFB11Q9NX14 153 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 SLC13A4Q9UKG4 626 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 A4GNTQ9UNA3 340 aa17.02■□□□□ 0.31
CAPN3-209ENST00000466222 ADRA2AP08913 450 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 ZNF136P52737 540 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 CD300CQ08708 224 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 EXT1Q16394 746 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 SCAIQ8N9R8 606 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 OR5L2Q8NGL0 311 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 OR8K3Q8NH51 312 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 M1APQ8TC57 530 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 ADAMTS17Q8TE56 1095 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 FNDC11Q9BVV2 318 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 TSSK6Q9BXA6 273 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 ASPNQ9BXN1 380 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 CACYBPQ9HB71 228 aaKnown RBP17.01■□□□□ 0.31
CAPN3-209ENST00000466222 SMURF1Q9HCE7 757 aa17.01■□□□□ 0.31
CAPN3-209ENST00000466222 DIMT1Q9UNQ2 313 aaKnown RBP17.01■□□□□ 0.31
CAPN3-209ENST00000466222 DMXL2Q8TDJ6 3036 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 CPSF4LA6NMK7 179 aaKnown RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 SYT5O00445 386 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 OIP5O43482 229 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 GMFGO60234 142 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 CYP7B1O75881 506 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 DXOO77932 396 aaKnown RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 WT1P19544 449 aaPredicted RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 CD82P27701 267 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 LSM11P83369 360 aaKnown RBP eCLIP17■□□□□ 0.31
CAPN3-209ENST00000466222 RTP5Q14D33 572 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 IGF2-ASQ6U949 168 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 MARCH3Q86UD3 253 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 TMCO6Q96DC7 493 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 PRRC1Q96M27 445 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 WDFY2Q96P53 400 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 RASL10BQ96S79 203 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 UBQLN4Q9NRR5 601 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 DNAJB12Q9NXW2 375 aaKnown RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 NPAP1Q9NZP6 1156 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 DNAJC27Q9NZQ0 273 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 C2orf72A6NCS6 295 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 SERINC4A6NH21 518 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 ZNF670-ZNF695F2Z2N8 137 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 MYL12BO14950 172 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 ITGA10O75578 1167 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 SOX14O95416 240 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 THY1P04216 161 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 GUSBP08236 651 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 GTF2E2P29084 291 aaKnown RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 PCYT1AP49585 367 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 RORCP51449 518 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 NRG3P56975 720 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 RGS8P57771 180 aaPredicted RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 SELENBP1Q13228 472 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 B3GNTL1Q67FW5 361 aaPredicted RBP17■□□□□ 0.31
CAPN3-209ENST00000466222 LYPD8Q6UX82 237 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 SLC7A13Q8TCU3 470 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 CDCP1Q9H5V8 836 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 QPCTLQ9NXS2 382 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 KLHL28Q9NXS3 571 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 SSR3Q9UNL2 185 aa17■□□□□ 0.31
CAPN3-209ENST00000466222 SLC35F4A4IF30 521 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 SNTNA6NMZ2 147 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 RAB36O95755 333 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 TP53P04637 393 aaPredicted RBP16.99■□□□□ 0.31
CAPN3-209ENST00000466222 LIPCP11150 499 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 PTNP21246 168 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 HTR2AP28223 471 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 TPTEP56180 551 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 FGFBP1Q14512 234 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 KLHL22Q53GT1 634 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 ENTPD8Q5MY95 495 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 BICRALQ6AI39 1079 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 C1orf94Q6P1W5 598 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 PODNL1Q6PEZ8 512 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms