RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NPIPA1Q9UND3 350 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SAMHD1Q9Y3Z3 626 aaKnown RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 AP4B1Q9Y6B7 739 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 MED12LQ86YW9 2145 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 DOCK7Q96N67 2140 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 H0Y3Z8 333 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 H0YHG0 523 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 H3BML4 177 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 TNFRSF11BO00300 401 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 PIP5K1CO60331 668 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ACTL6AO96019 429 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 IGF2P01344 180 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 PEPDP12955 493 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ANPEPP15144 967 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ZNF708P17019 499 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 CCNA2P20248 432 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 PTNP21246 168 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 FPR1P21462 350 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 IFNA8P32881 189 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 CLDN20P56880 219 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 RIPK1Q13546 671 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 BCL2A1Q16548 175 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 FGD3Q5JSP0 725 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 C1QL3Q5VWW1 255 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 MBOAT2Q6ZWT7 520 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 EPHX4Q8IUS5 362 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 P3H2Q8IVL5 708 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 HS3ST5Q8IZT8 346 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 PFN4Q8NHR9 129 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ABTB1Q969K4 478 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 KTI12Q96EK9 354 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 CENPNQ96H22 339 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 ARL5BQ96KC2 179 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 HS6ST2Q96MM7 605 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 TMEM185BQ9H7F4 350 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 DCLRE1BQ9H816 532 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 ASF1BQ9NVP2 202 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 SELENONQ9NZV5 590 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 STX18Q9P2W9 335 aaKnown RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 NKX1-2Q9UD57 310 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 SPIN1Q9Y657 262 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 U3KQV3 271 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 MYO18BQ8IUG5 2567 aa10.03□□□□□ -0.8
VCP-204ENST00000466100 UBR5O95071 2799 aaPredicted RBP10.03□□□□□ -0.8
VCP-204ENST00000466100 PHF3Q92576 2039 aaKnown RBP10.02□□□□□ -0.8
VCP-204ENST00000466100 A0A0J9YW62 118 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 ARRDC5A6NEK1 342 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 A8MVM7 634 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 FTCDNL1E5RQL4 147 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 H0YC42 278 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 KLF4O43474 513 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 IMPDH2P12268 514 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 POU3F2P20265 443 aaPredicted RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 FKBP2P26885 142 aaKnown RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 SFTPDP35247 375 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 OMPP47874 163 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 STARP49675 285 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 CLK1P49759 484 aaKnown RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 SUCLG1P53597 346 aaKnown RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 TPD52P55327 224 aaPredicted RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 CTBP2P56545 445 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 HSF1Q00613 529 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 LTBQ06643 244 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 NFATC3Q12968 1075 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 MYBPHQ13203 477 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 LAPTM4AQ15012 233 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.811e-8■■□□□ 11.4
VCP-204ENST00000466100 C1orf140Q5VVS0 124 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 SHQ1Q6PI26 577 aaKnown RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 C5orf46Q6UWT4 87 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 SLC46A3Q7Z3Q1 461 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 NRMQ8IXM6 262 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 RNF113BQ8IZP6 322 aaKnown RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 OR4K5Q8NGD3 323 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 OR6S1Q8NH40 331 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 TAAR8Q969N4 342 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 NRBF2Q96F24 287 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 WDYHV1Q96HA8 205 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 KLHL15Q96M94 604 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 TIMP4Q99727 224 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 BDH2Q9BUT1 245 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 POTEKPQ9BYX7 375 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 PRDM14Q9GZV8 571 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 GABARAPL1Q9H0R8 117 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 SEMA6AQ9H2E6 1030 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 LDAHQ9H6V9 325 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 SERINC1Q9NRX5 453 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 C20orf141Q9NUB4 165 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 C6orf203Q9P0P8 240 aaPredicted RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 TNFRSF10DQ9UBN6 386 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 HDGFL3Q9Y3E1 203 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 MAGED1Q9Y5V3 778 aaPredicted RBP10.02□□□□□ -0.81
VCP-204ENST00000466100 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
VCP-204ENST00000466100 TRAV36DV7A0A075B6V5 113 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms