RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ENOPH1Q9UHY7 261 aa4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 ITGA11Q9UKX5 1188 aa4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 PACSIN2Q9UNF0 486 aaPredicted RBP4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 DIMT1Q9UNQ2 313 aaKnown RBP4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 USH1CQ9Y6N9 552 aa4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 LOC100506127A0A0U1RQW1 187 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 SMIM28A0A1B0GU29 152 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ILVBLA1L0T0 632 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM47DPA6NHR8 397 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 EFCAB7A8K855 629 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 MEI4A8MW99 385 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM72CH0Y354 149 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 H0Y8G0 127 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 BLOC1S5-TXNDC5H3BN57 136 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 H7C0C1 242 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 RNF103O00237 685 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TOR1AO14656 332 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FPGTO14772 594 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CLOCKO15516 846 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PCDH7O60245 1069 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 AHSA1O95433 338 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 LSM8O95777 96 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 GSRP00390 522 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 SERPINA5P05154 406 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CSN3P07498 182 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 H2AFZP0C0S5 128 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PRSS56P0CW18 603 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 NQO1P15559 274 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TCF4P15884 667 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CDKN1AP38936 164 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 OR1G1P47890 313 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 HCAR3P49019 387 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PLK1P53350 603 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 GNG11P61952 73 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 AP1S1P61966 158 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PPARDQ03181 441 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 YWHAHQ04917 246 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF177Q13360 481 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ART3Q13508 389 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TGFBIQ15582 683 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 KCNJ8Q15842 424 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 DUSP7Q16829 419 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 RIPPLY2Q5TAB7 128 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM72AQ5TYM5 149 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM72DQ6L9T8 149 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FUT10Q6P4F1 479 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PODNL1Q6PEZ8 512 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PRSS55Q6UWB4 352 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CD300LGQ6UXG3 332 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 H2AFVQ71UI9 128 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ERN2Q76MJ5 926 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 FAM72BQ86X60 149 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 BBS7Q8IWZ6 715 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ENTHD1Q8IYW4 607 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 C10orf53Q8N6V4 93 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 C12orf29Q8N999 325 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 OR4K1Q8NGD4 311 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 VANGL1Q8TAA9 524 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 BORCS5Q969J3 196 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 NTAN1Q96AB6 310 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF501Q96CX3 271 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PIWIL1Q96J94 861 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TRNT1Q96Q11 434 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CYTH2Q99418 400 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ATP6V0BQ99437 205 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PRRG4Q9BZD6 226 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 SDCBP2Q9H190 292 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CXCL16Q9H2A7 254 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 METTL8Q9H825 291 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 RNPEPL1Q9HAU8 725 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CHST11Q9NPF2 352 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PLCXD1Q9NUJ7 323 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TXLNGQ9NUQ3 528 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 ETNK2Q9NVF9 386 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 RNF14Q9UBS8 474 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 CYB5R1Q9UHQ9 305 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 GNPTGQ9UJJ9 305 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 UBQLN1Q9UMX0 589 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TFR2Q9UP52 801 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 TCF19Q9Y242 345 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 EIF3LQ9Y262 564 aaKnown RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 PRG3Q9Y2Y8 225 aaPredicted RBP4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 GMPPBQ9Y5P6 360 aa4.38□□□□□ -1.71
CACNA1C-223ENST00000465278 A0A1W2PN81 502 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 XKRY2A2RUG3 117 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 ANTXRLA6NF34 631 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 ATP6V1G2-DDX39BF2Z307 99 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 H0YJX3 145 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 ZNF701M0R085 212 aaPredicted RBP4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 PGRMC1O00264 195 aaKnown RBP4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 ANGPT2O15123 496 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 AQP9O43315 295 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 FMO6PO60774 539 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 ZG16O60844 167 aa4.37□□□□□ -1.71
CACNA1C-223ENST00000465278 TRIM3O75382 744 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms