RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ZNF440Q8IYI8 595 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 BBS10Q8TAM1 723 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ANKRD27Q96NW4 1050 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 TMEM38AQ9H6F2 299 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 HDGFL3Q9Y3E1 203 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ZNF716A6NP11 495 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 EVPLLA8MZ36 301 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ANGPT2O15123 496 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ZNF208O43345 1280 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ETS2P15036 469 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 AQP1P29972 269 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CLK1P49759 484 aaKnown RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 ARFIP2P53365 341 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CAPRIN1Q14444 709 aaKnown RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 WBP2NLQ6ICG8 309 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 REEP3Q6NUK4 255 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 STK32CQ86UX6 486 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
XRN1-203ENST00000463916 PTOV1Q86YD1 416 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CGREF1Q99674 301 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 CCDC134Q9H6E4 229 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 TMEM181Q9P2C4 612 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 PLEKHA6Q9Y2H5 1048 aa11.51□□□□□ -0.57
XRN1-203ENST00000463916 TROVE2P10155 538 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRN1-203ENST00000463916 UQCRBP14927 111 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 FPR1P21462 350 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 CRYGSP22914 178 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
XRN1-203ENST00000463916 OR2B6P58173 313 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 SCARB2Q14108 478 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 HSP90B2PQ58FF3 399 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 TSPEARQ8WU66 669 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 SAR1AQ9NR31 198 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
XRN1-203ENST00000463916 ZNF226Q9NYT6 803 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 ZNF724A8MTY0 619 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 ADAP00813 363 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 SLC6A2P23975 617 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 CXCR1P25024 350 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 LOXP28300 417 aaPredicted RBP11.5□□□□□ -0.57
XRN1-203ENST00000463916 NFYCQ13952 458 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 C3orf49Q96BT1 292 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 DDIT4LQ96D03 193 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 ZNF317Q96PQ6 595 aaPredicted RBP11.5□□□□□ -0.57
XRN1-203ENST00000463916 ACTR6Q9GZN1 396 aa11.5□□□□□ -0.57
XRN1-203ENST00000463916 KAT8Q9H7Z6 458 aaKnown RBP11.5□□□□□ -0.57
XRN1-203ENST00000463916 KLF4O43474 513 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 PSMB1P20618 241 aaKnown RBP11.49□□□□□ -0.57
XRN1-203ENST00000463916 HTR2AP28223 471 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 PRKAR1BP31321 381 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
XRN1-203ENST00000463916 OR3A2P47893 321 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 COPZ1P61923 177 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 DMTNQ08495 405 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 KLF10Q13118 480 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 CEACAM7Q14002 265 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 S100PBPQ96BU1 408 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 PIK3IP1Q96FE7 263 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 GPR52Q9Y2T5 361 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 F8P00451 2351 aa11.49□□□□□ -0.57
XRN1-203ENST00000463916 PRRC2AP48634 2157 aaKnown RBP11.49□□□□□ -0.57
XRN1-203ENST00000463916 DNPH1O43598 174 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 TPST2O60704 377 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 MAP2K6P52564 334 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 PDK3Q15120 406 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 SFRP5Q5T4F7 317 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 GALNT5Q7Z7M9 940 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 ATG4DQ86TL0 474 aaPredicted RBP11.48□□□□□ -0.57
XRN1-203ENST00000463916 POTEKPQ9BYX7 375 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 CACYBPQ9HB71 228 aaKnown RBP11.48□□□□□ -0.57
XRN1-203ENST00000463916 LOC100653049A0A140TA62 436 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 LIPT2A6NK58 231 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 FXYD1O00168 92 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 NPIPB7O75200 414 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 KRT34O76011 436 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 MFN2O95140 757 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 GOSR1O95249 250 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
XRN1-203ENST00000463916 GZMMP51124 257 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 ART1P52961 327 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 SLC16A1P53985 500 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 PCBP3P57721 371 aaKnown RBP11.48□□□□□ -0.57
XRN1-203ENST00000463916 SLC35A1P78382 337 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 EGR4Q05215 589 aa11.48□□□□□ -0.57
XRN1-203ENST00000463916 OR7A5Q15622 319 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms