RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DCDP81605 110 aaKnown RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 OR1Q1Q15612 314 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 MAPK14Q16539 360 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 PRTGQ2VWP7 1150 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 MRPL2Q5T653 305 aaKnown RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 GARNL3Q5VVW2 1013 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 SLC30A6Q6NXT4 461 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 OR4N5Q8IXE1 308 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 LNX2Q8N448 690 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 FAM83FQ8NEG4 500 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 OR52L1Q8NGH7 329 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 TMEM239Q8WW34 195 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 ASB15Q8WXK1 588 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 AP3S1Q92572 193 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 ANKRD9Q96BM1 317 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 UBQLN3Q9H347 655 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 ADAP2Q9NPF8 381 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 CUTCQ9NTM9 273 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 ASB6Q9NWX5 421 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 IRAK4Q9NWZ3 460 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 DHCR7Q9UBM7 475 aaKnown RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 CBLCQ9ULV8 474 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 BAIAP2Q9UQB8 552 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 CMAHPQ9Y471 501 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 MRPS18BQ9Y676 258 aaKnown RBP9.09□□□□□ -0.95
PTPRD-207ENST00000463477 V9GYH0 126 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 PIEZO2Q9H5I5 2752 aa9.09□□□□□ -0.95
PTPRD-207ENST00000463477 A0A1B0GX78 115 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CDC42EP2O14613 210 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ATXN7O15265 892 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 PIP5K1CO60331 668 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CDRT1O95170 752 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CD53P19397 219 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ALAS2P22557 587 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CFL1P23528 166 aaKnown RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 HTR2AP28223 471 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 GTF2E2P29084 291 aaKnown RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 RBM34P42696 430 aaKnown RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 GPR4P46093 362 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 IGLV3-21P80748 117 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 HOXC5Q00444 222 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF155Q12901 538 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 SLC13A2Q13183 592 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 GPR68Q15743 365 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 NKAIN1Q4KMZ8 207 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 PCSK4Q6UW60 755 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 TTLL10Q6ZVT0 673 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 KLHL36Q8N4N3 616 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 TMEM52Q8NDY8 209 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 SIMC1Q8NDZ2 872 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 OIT3Q8WWZ8 545 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 KCNS3Q9BQ31 491 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF426Q9BUY5 554 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 OR52D1Q9H346 318 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 SNTG1Q9NSN8 517 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 STARD5Q9NSY2 213 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ERVK13-1Q9NX77 482 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 NPAP1Q9NZP6 1156 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 H2AFY2Q9P0M6 372 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 PLEKHB1Q9UF11 243 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 KCNE5Q9UJ90 142 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 TCFL5Q9UL49 500 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 POLHQ9Y253 713 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CARD8Q9Y2G2 431 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 NTNG1Q9Y2I2 539 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 GPR52Q9Y2T5 361 aa9.08□□□□□ -0.96
PTPRD-207ENST00000463477 CAB39Q9Y376 341 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-207ENST00000463477 ATRXP46100 2492 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CENPVL1A0A0U1RR11 272 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF860A6NHJ4 632 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 C9J4A7 227 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 WWP2O00308 870 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 BHLHE40O14503 412 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CHP2O43745 196 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 LDB3O75112 727 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 KLF7O75840 302 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 KCNK2O95069 426 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CBX7O95931 251 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 HLA-DPB1P04440 258 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 EIF2S1P05198 315 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ZGLP1P0C6A0 271 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 BMP7P18075 431 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 TBXA2RP21731 343 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 PTBP1P26599 531 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 FXYD6P3P58550 94 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ERV3-1Q14264 604 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 TBR1Q16650 682 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 LINC00303Q3SY05 128 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GLYR1Q49A26 553 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CLEC12AQ5QGZ9 265 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CCNJQ5T5M9 372 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 OR2G6Q5TZ20 316 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 C1orf189Q5VU69 101 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 FAM198BQ6UWH4 519 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CXXC5Q7LFL8 322 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 PRSS41Q7RTY9 318 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms