RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TEAD3Q99594 435 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 NXF2Q9GZY0 626 aaKnown RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 TOR4AQ9NXH8 423 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 MRTO4Q9UKD2 239 aaKnown RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 SF3B6Q9Y3B4 125 aaKnown RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 IER3IP1Q9Y5U9 82 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 GPR179Q6PRD1 2367 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 RIIAD1A6NNX1 92 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 B4DXG7 233 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 YKT6O15498 198 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 SCO2O43819 266 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 OR7A10O76100 309 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 NDUFB2O95178 105 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 INSL4Q14641 139 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 INAQ16352 499 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 FAM199XQ6PEV8 388 aaPredicted RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 SLC23A3Q6PIS1 610 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 OVCH1Q7RTY7 1134 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 DTWD2Q8NBA8 298 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 OR51L1Q8NGJ5 315 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ZNF563Q8TA94 476 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 FNDC8Q8TC99 324 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 KTI12Q96EK9 354 aaPredicted RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 ASPNQ9BXN1 380 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 BARHL1Q9BZE3 327 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 LAT2Q9GZY6 243 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 KLHL1Q9NR64 748 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 SEC14L4Q9UDX3 406 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 C2orf72A6NCS6 295 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 SAGE2PA6NJ88 616 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 TMEM200CA6NKL6 621 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 VSTM2BA6NLU5 285 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 OR6C76A6NM76 312 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ALG1L2C9J202 215 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 NDUFB5O43674 189 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 CER1O95813 267 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 CCL4P13236 92 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ZNF3P17036 446 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 HK1P19367 917 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 RPS4XP62701 263 aaKnown RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 VASNQ6EMK4 673 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 C22orf42Q6IC83 251 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 SYT14Q8NB59 555 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 SEMA4CQ9C0C4 833 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 HMG20AQ9NP66 347 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 TXNL4BQ9NX01 149 aaKnown RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 CCDC59Q9P031 241 aaKnown RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 M0R296 226 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 MEN1O00255 615 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 NTN3O00634 580 aaPredicted RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 FADS1O60427 444 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 PAICSP22234 425 aaKnown RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 ITPKBP27987 946 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 EVI2BP34910 448 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 AQP2P41181 271 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ERVK-25P63136 954 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 TPBGQ13641 420 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ZNF74Q16587 644 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 OR5M10Q6IEU7 315 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 PAPD4Q6PIY7 484 aaKnown RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 KLBQ86Z14 1044 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 RFLNBQ8N5W9 214 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 PSD4Q8NDX1 1056 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 RASD2Q96D21 266 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 NMNAT3Q96T66 252 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 TBL1XR1Q9BZK7 514 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ADAM19Q9H013 955 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 MMP27Q9H306 513 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ADGRL4Q9HBW9 690 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 ZNF337Q9Y3M9 751 aa11.68□□□□□ -0.54
VAPB-203ENST00000463370 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
VAPB-203ENST00000463370 TEX51A0A1B0GUA7 166 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 PNMTP11086 282 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 HOXD12P35452 270 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 RPL4P36578 427 aaKnown RBP11.67□□□□□ -0.54
VAPB-203ENST00000463370 HCCSP53701 268 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 PNLIPRP2P54317 469 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 EMP2P54851 167 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 FBXW4P57775 412 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 FABP5Q01469 135 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 MXD1Q05195 221 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 ARHGAP11AQ6P4F7 1023 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 KLHL36Q8N4N3 616 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 ACBD7Q8N6N7 88 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 C10orf53Q8N6V4 93 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 BMPERQ8N8U9 685 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 FAM98AQ8NCA5 519 aaKnown RBP11.67□□□□□ -0.54
VAPB-203ENST00000463370 OR10H4Q8NGA5 316 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 CEP76Q8TAP6 659 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 OIT3Q8WWZ8 545 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 UFD1Q92890 307 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms