RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TRAF6Q9Y4K3 522 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 KCNE3Q9Y6H6 103 aa12.73□□□□□ -0.37
DNMT3A-207ENST00000461228 MGAM2Q2M2H8 2515 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 RNF103-CHMP3A0A140T963 221 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 OR6C65A6NJZ3 312 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 M0R1B8 84 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 KRT4P19013 534 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 PRPS1P60891 318 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 SLC35A1P78382 337 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 SLC25A3Q00325 362 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 SLC17A1Q14916 467 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 C6orf136Q5SQH8 315 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 CASP12Q6UXS9 341 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 C16orf62Q7Z3J2 963 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 PMM1Q92871 262 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 APOPT1Q96IL0 206 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 SLC35G5Q96KT7 338 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 SORCS2Q96PQ0 1159 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 CTPS2Q9NRF8 586 aa12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 CRNNQ9UBG3 495 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-207ENST00000461228 ARPC4-TTLL3A0A0A6YYG9 625 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 B9A039 149 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 ATP6V1G2-DDX39BF2Z307 99 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 FCMRO60667 390 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 CHRNGP07510 517 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 TACSTD2P09758 323 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 PCMT1P22061 227 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 NTF4P34130 210 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 KHKP50053 298 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 PLAURQ03405 335 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 CHRNEQ04844 493 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 DPY19L1Q2PZI1 675 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 MST1LQ2TV78 715 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 TYW3Q6IPR3 259 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 C17orf53Q8N3J3 647 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 FNDC5Q8NAU1 212 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 NUP37Q8NFH4 326 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 DDIT4LQ96D03 193 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 C1orf159Q96HA4 380 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 PLK3Q9H4B4 646 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF442Q9H7R0 627 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 CA10Q9NS85 328 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 WDR45Q9Y484 360 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 MEGF8Q7Z7M0 2845 aa12.71□□□□□ -0.37
DNMT3A-207ENST00000461228 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 TMEM233B4DJY2 109 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 UQCRBP14927 111 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 MATN1P21941 496 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 SOAT1P35610 550 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 CLDN8P56748 225 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 FUT5Q11128 374 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 GPR68Q15743 365 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 DEF8Q6ZN54 512 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 FRRS1Q6ZNA5 592 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 ADGRG3Q86Y34 549 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 RIBC1Q8N443 379 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 OR52E4Q8NGH9 312 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 OR5AK3PQ8NH89 298 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 ZNF563Q8TA94 476 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 TESCQ96BS2 214 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 SLC7A10Q9NS82 523 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 MKLN1Q9UL63 735 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 ATP23Q9Y6H3 246 aa12.7□□□□□ -0.38
DNMT3A-207ENST00000461228 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 SLC35F4A4IF30 521 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 TCF21O43680 179 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 FZD7O75084 574 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 VAMP5O95183 116 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 IGLV1-44P01699 117 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 NUDT17P0C025 328 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 TFPIP10646 304 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 PTNP21246 168 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 RPS4Y1P22090 263 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 SLC1A3P43003 542 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 RPS26P62854 115 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 KCNJ10P78508 379 aa12.69□□□□□ -0.38
DNMT3A-207ENST00000461228 HPCAP84074 193 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms