RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OR2B6P58173 313 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 CDK6Q00534 326 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 P2RY6Q15077 328 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 ABLIM2Q6H8Q1 611 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 C22orf34Q6ZV56 151 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 CXorf67Q86X51 503 aaPredicted RBP20.42■□□□□ 0.86
PTPN4-208ENST00000460289 KRT73Q86Y46 540 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 CADM2Q8N3J6 435 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 DPP10Q8N608 796 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 NFKBIDQ8NI38 313 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 PIGXQ8TBF5 258 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 PIK3IP1Q96FE7 263 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 SPATA5L1Q9BVQ7 753 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 POTEKPQ9BYX7 375 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 ACTR6Q9GZN1 396 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 TMEM38AQ9H6F2 299 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 PLEKHA6Q9Y2H5 1048 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 CHST2Q9Y4C5 530 aa20.42■□□□□ 0.86
PTPN4-208ENST00000460289 HRNRQ86YZ3 2850 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 AKAP6Q13023 2319 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 IGKV3D-15A0A087WSY6 115 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 GPR171O14626 319 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 GCM2O75603 506 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 KLK2P20151 261 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 SLC6A2P23975 617 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 KEAP1Q14145 624 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 RUNDC3AQ59EK9 446 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 SFRP5Q5T4F7 317 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 ZNF100Q8IYN0 542 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 ZNF775Q96BV0 537 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 ZNF300Q96RE9 604 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 USB1Q9BQ65 265 aaKnown RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 NAA11Q9BSU3 229 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-208ENST00000460289 TMEM120AQ9BXJ8 343 aa20.41■□□□□ 0.86
PTPN4-208ENST00000460289 AKAP9Q99996 3911 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 ZNF814B7Z6K7 855 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 SIAH2O43255 324 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 CNOT4O95628 575 aaKnown RBP20.4■□□□□ 0.86
PTPN4-208ENST00000460289 ADAP00813 363 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 THBDP07204 575 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 PRG2P13727 222 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 PRKAR1BP31321 381 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 H3F3AP84243 136 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 ITGADQ13349 1161 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 Q6ZT83 130 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 DHDDSQ86SQ9 333 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 SERPINA11Q86U17 422 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 MBD6Q96DN6 1003 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 DNAJA3Q96EY1 480 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 ZNF607Q96SK3 696 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 IKZF5Q9H5V7 419 aa20.4■□□□□ 0.86
PTPN4-208ENST00000460289 A0A1W2PPR1 153 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 ZNF716A6NP11 495 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 A8MVM7 634 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 GPIP06744 558 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 FPR1P21462 350 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 IL32P24001 234 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 ARFIP2P53365 341 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 SLC16A1P53985 500 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 SCARB2Q14108 478 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 BEX5Q5H9J7 111 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 C10orf111Q8N326 155 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 KISS1RQ969F8 398 aaPredicted RBP20.39■□□□□ 0.85
PTPN4-208ENST00000460289 ANKRD27Q96NW4 1050 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 CGREF1Q99674 301 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 CPPED1Q9BRF8 314 aaPredicted RBP20.39■□□□□ 0.85
PTPN4-208ENST00000460289 CXXC4Q9H2H0 198 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 MED4Q9NPJ6 270 aa20.39■□□□□ 0.85
PTPN4-208ENST00000460289 NOSIPQ9Y314 301 aaKnown RBP20.39■□□□□ 0.85
PTPN4-208ENST00000460289 PRORSD1PA6NEY8 169 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 SERPINB7O75635 380 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 VIMP08670 466 aaKnown RBP20.38■□□□□ 0.85
PTPN4-208ENST00000460289 IMPDH2P12268 514 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 IDUAP35475 653 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 CCDC103Q8IW40 242 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 BHLHE22Q8NFJ8 381 aaPredicted RBP20.38■□□□□ 0.85
PTPN4-208ENST00000460289 HSD17B8Q92506 261 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 S100PBPQ96BU1 408 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 ALPK1Q96QP1 1244 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 FGFR1OP2Q9NVK5 253 aa20.38■□□□□ 0.85
PTPN4-208ENST00000460289 ZC3H12DA2A288 527 aaKnown RBP20.37■□□□□ 0.85
PTPN4-208ENST00000460289 KLF4O43474 513 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 ATE1O95260 518 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 NR1H2P55055 460 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 NFYCQ13952 458 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 CEACAM7Q14002 265 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 ADRM1Q16186 407 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 DHRS4L2Q6PKH6 230 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 PAQR6Q6TCH4 344 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 RETREG3Q86VR2 466 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 HIPK4Q8NE63 616 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 APH1AQ96BI3 265 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 TAPBPLQ9BX59 468 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 PARPBPQ9NWS1 579 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 RPS6KB2Q9UBS0 482 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 PRSS50Q9UI38 385 aa20.37■□□□□ 0.85
PTPN4-208ENST00000460289 MRPL33O75394 65 aaKnown RBP20.36■□□□□ 0.85
PTPN4-208ENST00000460289 RBBP4Q09028 425 aa20.36■□□□□ 0.85
PTPN4-208ENST00000460289 WFDC8Q8IUA0 241 aa20.36■□□□□ 0.85
PTPN4-208ENST00000460289 C11orf65Q8NCR3 313 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms