RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 TMEM181Q9P2C4 612 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 TRAPPC4Q9Y296 219 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 A0A0G2JPF8 293 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 TMEM247A6NEH6 219 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 HNRNPCL2B2RXH8 293 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 HNRNPCL3B7ZW38 293 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 CLIC1O00299 241 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 HNRNPCL1O60812 293 aaKnown RBP16.75■□□□□ 0.27
COL5A1-203ENST00000460264 RAMP1O60894 148 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 PLAUP00749 431 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 GKN3PP0CG01 181 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 HNRNPCL4P0DMR1 293 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 BMP2P12643 396 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 H2AFXP16104 143 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-203ENST00000460264 MAP2K6P52564 334 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 SLC16A1P53985 500 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 OR2B6P58173 313 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 H3F3AP84243 136 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 FADDQ13158 208 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 TAB1Q15750 504 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 LRIF1Q5T3J3 769 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 MSRB3Q8IXL7 192 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 ZNF100Q8IYN0 542 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 SPDL1Q96EA4 605 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 TMEM204Q9BSN7 226 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 POTEKPQ9BYX7 375 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 RAD21L1Q9H4I0 556 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 SLC52A3Q9NQ40 469 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 ARGLU1Q9NWB6 273 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-203ENST00000460264 CHST2Q9Y4C5 530 aa16.75■□□□□ 0.27
COL5A1-203ENST00000460264 VPS13CQ709C8 3753 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 ZC3H12DA2A288 527 aaKnown RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 SMPD2O60906 423 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 LYZL6O75951 148 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 IMPDH2P12268 514 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 COX5AP20674 150 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 NKX6-1P78426 367 aaPredicted RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 LARS2Q15031 903 aaKnown RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 PRAMEF8Q5VWM4 474 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 PRAMEF7Q5VXH5 474 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 ALKBH2Q6NS38 261 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 SEZ6L2Q6UXD5 910 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 BHLHA15Q7RTS1 189 aaPredicted RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 CCDC103Q8IW40 242 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 CLIP4Q8N3C7 705 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 HSD17B8Q92506 261 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 MAL2Q969L2 176 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 USB1Q9BQ65 265 aaKnown RBP16.74■□□□□ 0.27
COL5A1-203ENST00000460264 SPATA9Q9BWV2 254 aa16.74■□□□□ 0.27
COL5A1-203ENST00000460264 PRG2P13727 222 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 IGHV1-2P23083 117 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 ATP4BP51164 291 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 SLC35A1P78382 337 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 ZSWIM7Q19AV6 140 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 LRRC75A-AS1Q8N1F1 130 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 CKAP2Q8WWK9 683 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 IGFBPL1Q8WX77 278 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 MAGEB18Q96M61 343 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 CACYBPQ9HB71 228 aaKnown RBP16.73■□□□□ 0.27
COL5A1-203ENST00000460264 BCL2L10Q9HD36 194 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 TMEM45AQ9NWC5 275 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 SLAMF8Q9P0V8 285 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 PRDM4Q9UKN5 801 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 ZNF232Q9UNY5 417 aa16.73■□□□□ 0.27
COL5A1-203ENST00000460264 NOSIPQ9Y314 301 aaKnown RBP16.73■□□□□ 0.27
COL5A1-203ENST00000460264 CADP27708 2225 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 TRBV5-3A0A0A0MS03 114 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 GPR171O14626 319 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 EIF1BO60739 113 aaKnown RBP16.72■□□□□ 0.27
COL5A1-203ENST00000460264 NTF4P34130 210 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-203ENST00000460264 SQLEQ14534 574 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 AGKQ53H12 422 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 SHEQ5VZ18 495 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 WBP2NLQ6ICG8 309 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 SERPINA11Q86U17 422 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 CADM2Q8N3J6 435 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 BBS10Q8TAM1 723 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 STON2Q8WXE9 905 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 APH1AQ96BI3 265 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 ARMC7Q9H6L4 198 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 NGBQ9NPG2 151 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 VAPAQ9P0L0 249 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 IFT52Q9Y366 437 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 GMEB1Q9Y692 573 aa16.72■□□□□ 0.27
COL5A1-203ENST00000460264 C5orf58C9J3I9 102 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 HS3ST1O14792 307 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 PGM3O95394 542 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 IGHV3-9P01782 118 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 ARAFP10398 606 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 FOSL1P15407 271 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 PPIBP23284 216 aaKnown RBP16.71■□□□□ 0.27
COL5A1-203ENST00000460264 CXCR1P25024 350 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 ADSLP30566 484 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-203ENST00000460264 IDUAP35475 653 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 COPZ1P61923 177 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms