RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TNK1Q13470 666 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 DAG1Q14118 895 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 GPR68Q15743 365 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 OCLNQ16625 522 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 PDZK1Q5T2W1 519 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 RHBDD2Q6NTF9 364 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 RRM2BQ7LG56 351 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 HMGN2P46Q86SG4 172 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 ZNF511Q8NB15 262 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 OR52R1Q8NGF1 315 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 GPR151Q8TDV0 419 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 ZNF300Q96RE9 604 aaPredicted RBP9.57□□□□□ -0.88
HERC4-207ENST00000460168 MED18Q9BUE0 208 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 CNPPD1Q9BV87 410 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 ASCL3Q9NQ33 180 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 SMPD3Q9NY59 655 aaPredicted RBP9.57□□□□□ -0.88
HERC4-207ENST00000460168 VNN3Q9NY84 501 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 IFT80Q9P2H3 777 aaPredicted RBP9.57□□□□□ -0.88
HERC4-207ENST00000460168 HYAL3O43820 417 aaPredicted RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 SCRG1O75711 98 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CBX7O95931 251 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ALPLP05186 524 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 IFI6P09912 130 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ACP2P11117 423 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CD40LGP29965 261 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 RYKP34925 604 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PDX1P52945 283 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ZNF45Q02386 682 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 BIKQ13323 160 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 DYRK1AQ13627 763 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ZNHIT3Q15649 155 aaPredicted RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 ZNF181Q2M3W8 571 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 VWA2Q5GFL6 755 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 NHSL2Q5HYW2 709 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PRAMEF8Q5VWM4 474 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PRAMEF7Q5VXH5 474 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 TMEM179BQ7Z7N9 219 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PRSS58Q8IYP2 241 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 COX18Q8N8Q8 333 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ZNF671Q8TAW3 534 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 HTRA1Q92743 480 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ZNF354BQ96LW1 612 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 AMBRA1Q9C0C7 1298 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SLC38A1Q9H2H9 487 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CACYBPQ9HB71 228 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 NECTIN3Q9NQS3 549 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 DUSP22Q9NRW4 184 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 THSD1Q9NS62 852 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 LANCL2Q9NS86 450 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 MMACHCQ9Y4U1 282 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PCDHGB2Q9Y5G2 931 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CLDN16Q9Y5I7 305 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 NPFFR2Q9Y5X5 522 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 NINQ8N4C6 2090 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 LOC100506127A0A0U1RQW1 187 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PRAMEF25A6NGN4 478 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 NTN3O00634 580 aaPredicted RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 CPNE3O75131 537 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 FPR1P21462 350 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PRKACGP22612 351 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SSTR4P31391 388 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 SPIBQ01892 262 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SF3A2Q15428 464 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 DESI1Q6ICB0 168 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 KRT80Q6KB66 452 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 HEPHL1Q6MZM0 1159 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PWWP2BQ6NUJ5 590 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SLC27A4Q6P1M0 643 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ATCAYQ86WG3 371 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PPP1R3BQ86XI6 285 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CCDC103Q8IW40 242 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 RNF113BQ8IZP6 322 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 GPR32P1Q8NGA4 272 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 MOSPD2Q8NHP6 518 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CYGBQ8WWM9 190 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 STACQ99469 402 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 CDC6Q99741 560 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 ADI1Q9BV57 179 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SF3B5Q9BWJ5 86 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 SLC26A1Q9H2B4 701 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 SMURF2Q9HAU4 748 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 TREM1Q9NP99 234 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 PNO1Q9NRX1 252 aaKnown RBP9.56□□□□□ -0.88
HERC4-207ENST00000460168 MKLN1Q9UL63 735 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 WDR45Q9Y484 360 aa9.56□□□□□ -0.88
HERC4-207ENST00000460168 C17orf105B2RV13 164 aa9.55□□□□□ -0.88
HERC4-207ENST00000460168 J3KTA2 159 aa9.55□□□□□ -0.88
HERC4-207ENST00000460168 HRKO00198 91 aa9.55□□□□□ -0.88
HERC4-207ENST00000460168 DLGAP1O14490 977 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms