RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SLC25A12O75746 678 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 ST13P50502 369 aaKnown RBP22.17■■□□□ 1.14
U2AF1-204ENST00000459639 ZNF41P51814 821 aaPredicted RBP22.17■■□□□ 1.14
U2AF1-204ENST00000459639 MEDAGQ5VYS4 303 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 C5orf46Q6UWT4 87 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 ADGRG3Q86Y34 549 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 LNX2Q8N448 690 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 TMEM163Q8TC26 289 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 FGF11Q92914 225 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 TNFRSF13CQ96RJ3 184 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 IL20RAQ9UHF4 553 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 TEKT2Q9UIF3 430 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 BAIAP2Q9UQB8 552 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 SURF4O15260 269 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 SUSD5O60279 629 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 SLC6A6P31641 620 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 ALDH3B2P48448 385 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 SLC25A53Q5H9E4 307 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 ZNF468Q5VIY5 522 aaPredicted RBP22.16■■□□□ 1.14
U2AF1-204ENST00000459639 THSD4Q6ZMP0 1018 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 CYP4Z2PQ8N1L4 340 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 WDSUB1Q8N9V3 476 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 FKBP14Q9NWM8 211 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 SNX5Q9Y5X3 404 aa22.16■■□□□ 1.14
U2AF1-204ENST00000459639 TRAV36DV7A0A075B6V5 113 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 TMEM72A0PK05 275 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 CLCA1A8K7I4 914 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 TLX2O43763 284 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-204ENST00000459639 GFRA3O60609 400 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 NDUFB2O95178 105 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 CCNA2P20248 432 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 APOBEC1P41238 236 aaKnown RBP22.15■■□□□ 1.14
U2AF1-204ENST00000459639 NUDT6P53370 316 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 RPS4XP62701 263 aaKnown RBP22.15■■□□□ 1.14
U2AF1-204ENST00000459639 POMZP3Q6PJE2 187 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 ARSKQ6UWY0 536 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 SPARTQ8N0X7 666 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 BEST3Q8N1M1 668 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 OR4K17Q8NGC6 315 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 STK35Q8TDR2 534 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 KTI12Q96EK9 354 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-204ENST00000459639 PLEKHA8Q96JA3 519 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 MRGPRX4Q96LA9 322 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 LHPPQ9H008 270 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 ENKD1Q9H0I2 346 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 PTGES2Q9H7Z7 377 aa22.15■■□□□ 1.14
U2AF1-204ENST00000459639 CEP250Q9BV73 2442 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 A8MVM7 634 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 FAM47E-STBD1D6RA91 191 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 LRRN3E7EW58 273 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 NPIPB7O75200 414 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 ENTPD6O75354 484 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 PLPPR5Q32ZL2 321 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 ANKDD1AQ495B1 522 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 PLCZ1Q86YW0 608 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 LRRC17Q8N6Y2 441 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 CLEC1AQ8NC01 280 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 RHNO1Q9BSD3 238 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 IFT27Q9BW83 186 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 FKRPQ9H9S5 495 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 PROK2Q9HC23 129 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 VCX3AQ9NNX9 186 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 NANSQ9NR45 359 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 DNAJC27Q9NZQ0 273 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 VDAC3Q9Y277 283 aa22.14■■□□□ 1.14
U2AF1-204ENST00000459639 DMXL1Q9Y485 3027 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 SNPHO15079 494 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 RGS10O43665 173 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 WISP1O95388 367 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 ITGA3P26006 1051 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 FOXF1Q12946 379 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 NADK2Q4G0N4 442 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 SYT14P1Q58G82 188 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 KCTD8Q6ZWB6 473 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 AHSA2Q719I0 299 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 C10orf53Q8N6V4 93 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 MYDGFQ969H8 173 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 C1GALT1C1Q96EU7 318 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 LRR1Q96L50 414 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 SIGLEC11Q96RL6 698 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 CNOT2Q9NZN8 540 aaKnown RBP22.14■■□□□ 1.13
U2AF1-204ENST00000459639 ERVK-18Q9QC07 812 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 ZNF229Q9UJW7 825 aa22.14■■□□□ 1.13
U2AF1-204ENST00000459639 SNX4O95219 450 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 ASAH2BP0C7U1 165 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 CYB561P49447 251 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 MAP2K6P52564 334 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 PRPS1P60891 318 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 PIGFQ07326 219 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 INPP5JQ15735 1006 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-204ENST00000459639 ABHD17BQ5VST6 288 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 PRSS48Q7RTY5 328 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 SATL1Q86VE3 508 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 GGHQ92820 318 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 TAAR8Q969N4 342 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 TMEM41AQ96HV5 264 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 MOGAT1Q96PD6 335 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 COPS4Q9BT78 406 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 AMBNQ9NP70 447 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 ABI3Q9P2A4 366 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms