RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KHKP50053 298 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 SLC35A1P78382 337 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 TXNL4AP83876 142 aaKnown RBP18.92■□□□□ 0.62
CPNE1-220ENST00000458038 HPCAP84074 193 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 VLDLRP98155 873 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 TMEM249Q2WGJ8 235 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 EMBQ6PCB8 327 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 NUDCD3Q8IVD9 361 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 CLEC4FQ8N1N0 589 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 TESCQ96BS2 214 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 DDIT4LQ96D03 193 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 NEURL3Q96EH8 262 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 NAA11Q9BSU3 229 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-220ENST00000458038 AMBRA1Q9C0C7 1298 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 UPB1Q9UBR1 384 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 AMDHD2Q9Y303 409 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 PMF1-BGLAPU3KQ54 211 aa18.92■□□□□ 0.62
CPNE1-220ENST00000458038 ARFGEF3Q5TH69 2177 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 PDLIM1O00151 329 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 ZNF208O43345 1280 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 SCN2BO60939 215 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 MYZAPP0CAP1 466 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 OR2B6P58173 313 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 SAXO2Q658L1 398 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 FRRS1Q6ZNA5 592 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 LRRC34Q8IZ02 419 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 FAM168AQ92567 244 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 PROX1Q92786 737 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 AKTIPQ9H8T0 292 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 LPAR3Q9UBY5 353 aa18.91■□□□□ 0.62
CPNE1-220ENST00000458038 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-220ENST00000458038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.91■□□□□ 0.621e-8■■■□□ 16.1
CPNE1-220ENST00000458038 M0R1B8 84 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 GPRIN2O60269 458 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 ITGA5P08648 1049 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 PTNP21246 168 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 PAX7P23759 505 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 NTF4P34130 210 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 ETV4P43268 484 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 IDH2P48735 452 aaKnown RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 ANXA11P50995 505 aaKnown RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 POLR2HP52434 150 aaKnown RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 CLNS1AP54105 237 aaKnown RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 CASP8Q14790 479 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 GPAT3Q53EU6 434 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 TNFAIP8L2Q6P589 184 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 CASP12Q6UXS9 341 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 OLIG3Q7RTU3 272 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 CCDC103Q8IW40 242 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 RAB8BQ92930 207 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 TRNT1Q96Q11 434 aaKnown RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 OR11A1Q9GZK7 315 aa18.9■□□□□ 0.62
CPNE1-220ENST00000458038 MARCOQ9UEW3 520 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-220ENST00000458038 TMED7-TICAM2A0A0A6YYA0 188 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 FAAHO00519 579 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 TYROBPO43914 113 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 CPSF4O95639 269 aaKnown RBP18.89■□□□□ 0.61
CPNE1-220ENST00000458038 UQCRBP14927 111 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 APOBEC3AP31941 199 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-220ENST00000458038 CHI3L1P36222 383 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-220ENST00000458038 EFNA4P52798 201 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 CASP9P55211 416 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 GNA13Q14344 377 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 ZG16BQ96DA0 208 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 KCNK17Q96T54 332 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 PIF1Q9H611 641 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 SLC17A5Q9NRA2 495 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 TMED7Q9Y3B3 224 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 FLVCR1Q9Y5Y0 555 aa18.89■□□□□ 0.61
CPNE1-220ENST00000458038 CUBNO60494 3623 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 BCAS1O75363 584 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-220ENST00000458038 WNT11O96014 354 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 SERPINE1P05121 402 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 MPGP29372 298 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 SLC1A3P43003 542 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 SPOCK1Q08629 439 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 FUT5Q11128 374 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 SLC17A1Q14916 467 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 PDCD2Q16342 344 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-220ENST00000458038 CYB5R2Q6BCY4 276 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 PAQR6Q6TCH4 344 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 ABHD12BQ7Z5M8 362 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-220ENST00000458038 ANKRD46Q86W74 232 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 PHC2Q8IXK0 858 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 ZNF525Q8N782 197 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 TRIML2Q8N7C3 387 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 WDR31Q8NA23 367 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 C10orf105Q8TEF2 133 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 BOD1Q96IK1 185 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 SLC35A5Q9BS91 424 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 BEX2Q9BXY8 128 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 MTHFD2LQ9H903 347 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-220ENST00000458038 BTNL2Q9UIR0 455 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 OSGIN1Q9UJX0 560 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 RAP2CQ9Y3L5 183 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 ATP23Q9Y6H3 246 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 MALRD1Q5VYJ5 2156 aa18.88■□□□□ 0.61
CPNE1-220ENST00000458038 A0A1W2PR80 420 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 AGAP5A6NIR3 686 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 HMGN4O00479 90 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms