RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 IMPDH2P12268 514 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 FUT4P22083 530 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 CEACAM8P31997 349 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 TIMP3P35625 211 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 CASP6P55212 293 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 CDH12P55289 794 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 KCNC4Q03721 635 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 IFI44LQ53G44 452 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 ALG10BQ5I7T1 473 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 C9orf106Q8NAJ2 232 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 NAXEQ8NCW5 288 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 GEMIN6Q8WXD5 167 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 NSMCE2Q96MF7 247 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 PTDSS2Q9BVG9 487 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 POLR2J2Q9GZM3 115 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 POLR2J3Q9H1A7 115 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 TMEM27Q9HBJ8 222 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 STOML1Q9UBI4 398 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 ZNF175Q9Y473 711 aa16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 SPIN1Q9Y657 262 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-205ENST00000456312 CPSF4LA6NMK7 179 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 FFAR1O14842 300 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 CHP2O43745 196 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 CXCL13O43927 109 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 PRKD3O94806 890 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 RASSF2P50749 326 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 TRAP1Q12931 704 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 MYBPHQ13203 477 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 GUSBP1Q15486 140 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 ZNF239Q16600 458 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 RIPPLY2Q5TAB7 128 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 HBMQ6B0K9 141 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 TMPPEQ6ZT21 453 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 ATP6V1C2Q8NEY4 427 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 STK35Q8TDR2 534 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 WNT2BQ93097 391 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 TRIB1Q96RU8 372 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 POTEKPQ9BYX7 375 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 PAQR5Q9NXK6 330 aaPredicted RBP16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 ALKBH4Q9NXW9 302 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 SLC7A8Q9UHI5 535 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 HDGFL3Q9Y3E1 203 aa16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 USP9YO00507 2555 aaPredicted RBP16.7■□□□□ 0.26
SBDSP1-205ENST00000456312 TRAPPC13A5PLN9 417 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 A8MVM7 634 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 AQP8O94778 261 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PMS2P2O95744 297 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PNMTP11086 282 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 KLK2P20151 261 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 CXCR1P25024 350 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 EIF1AXP47813 144 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 DIO1P49895 249 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 RAC3P60763 192 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 RPS3AP61247 264 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 VLDLRP98155 873 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PIN1Q13526 163 aaPredicted RBP16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PON3Q15166 354 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 SF3B4Q15427 424 aaKnown RBP eCLIP16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 CYP2R1Q6VVX0 501 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 GDF7Q7Z4P5 450 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 FNDC9Q8TBE3 224 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 OSTF1Q92882 214 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 CCDC124Q96CT7 223 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 SLC47A1Q96FL8 570 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PYURFQ96I23 114 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PRRC1Q96M27 445 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 OR5B2Q96R09 309 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 RNF122Q9H9V4 155 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 TRAPPC4Q9Y296 219 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 COL12A1Q99715 3063 aa16.69■□□□□ 0.26
SBDSP1-205ENST00000456312 PTPN13Q12923 2485 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 A0A0G2JNJ9 132 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 FTCDNL1E5RQL4 147 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 J3KTA2 159 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 EBAG9O00559 213 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 OR5F1O95221 314 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 IFNW1P05000 195 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 CCNA2P20248 432 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 H3F3AP84243 136 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 PMPCAQ10713 525 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 TMEM211Q6ICI0 200 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 DEF8Q6ZN54 512 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 FAM26EQ8N5C1 309 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 ITLN2Q8WWU7 325 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 UTP4Q969X6 686 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 CPNE4Q96A23 557 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 DDIT4LQ96D03 193 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 SLC41A3Q96GZ6 507 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 TMEM43Q9BTV4 400 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 NDUFAF4Q9P032 175 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 RPS6KB2Q9UBS0 482 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 Q9UFV3 132 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 ING1Q9UK53 422 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 POMPQ9Y244 141 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 ENPP4Q9Y6X5 453 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
SBDSP1-205ENST00000456312 LIPT2A6NK58 231 aa16.67■□□□□ 0.26
SBDSP1-205ENST00000456312 SLC22A20A6NK97 555 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms