RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ZNF775Q96BV0 537 aaPredicted RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 ZHX1-C8orf76Q96EF9 292 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 TMEM19Q96HH6 336 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 COQ10BQ9H8M1 238 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 CHRNA9Q9UGM1 479 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 LEF1Q9UJU2 399 aaPredicted RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 NDUFAF1Q9Y375 327 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 SULT2B1O00204 365 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 ETV2O00321 342 aaPredicted RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 GCM2O75603 506 aaPredicted RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 CCNA2P20248 432 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 RPS4Y1P22090 263 aaKnown RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 ENPP1P22413 925 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 EDNRAP25101 427 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 POLR2HP52434 150 aaKnown RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 MVDP53602 400 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 SYT14P1Q58G82 188 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 ZNF311Q5JNZ3 666 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 RPS26P11Q5JNZ5 115 aaPredicted RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 PAGE3Q5JUK9 113 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 LRIF1Q5T3J3 769 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 GCNT6Q5T4J0 391 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 VRK2Q86Y07 508 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 KRT73Q86Y46 540 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 BBS10Q8TAM1 723 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 IGFBPL1Q8WX77 278 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 AKAP1Q92667 903 aaKnown RBP eCLIP11.48□□□□□ -0.57
TREX1-203ENST00000456089 NEUROG1Q92886 237 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 DNAJA3Q96EY1 480 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 TMEM120AQ9BXJ8 343 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 CTPS2Q9NRF8 586 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 KLHL9Q9P2J3 617 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 ZNF443Q9Y2A4 671 aaPredicted RBP11.48□□□□□ -0.57
TREX1-203ENST00000456089 CADP27708 2225 aa11.48□□□□□ -0.57
TREX1-203ENST00000456089 AP3D1O14617 1153 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 BCAS1O75363 584 aaPredicted RBP11.47□□□□□ -0.57
TREX1-203ENST00000456089 CNOT4O95628 575 aaKnown RBP11.47□□□□□ -0.57
TREX1-203ENST00000456089 THBS1P07996 1170 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 NUDT7P0C024 238 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 PPP3CBP16298 524 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 SLC6A2P23975 617 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 CXCR1P25024 350 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 SLC1A3P43003 542 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 CLK1P49759 484 aaKnown RBP11.47□□□□□ -0.57
TREX1-203ENST00000456089 DIO1P49895 249 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 ARFIP2P53365 341 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 PRAMEF8Q5VWM4 474 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 PRAMEF7Q5VXH5 474 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 TFAP2EQ6VUC0 442 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 TMPPEQ6ZT21 453 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 CADM2Q8N3J6 435 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 MAL2Q969L2 176 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 BDH2Q9BUT1 245 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 SPATA5L1Q9BVQ7 753 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 CCDC106Q9BWC9 280 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 FGFR1OP2Q9NVK5 253 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 RLIMQ9NVW2 624 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 VAPAQ9P0L0 249 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 SLAMF8Q9P0V8 285 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 KLHL13Q9P2N7 655 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 PRSS50Q9UI38 385 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 SLC13A4Q9UKG4 626 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 GPR52Q9Y2T5 361 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 HDGFL3Q9Y3E1 203 aa11.47□□□□□ -0.57
TREX1-203ENST00000456089 CSPG4Q6UVK1 2322 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 TMED7-TICAM2A0A0A6YYA0 188 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 CDHR4A6H8M9 788 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 HS3ST1O14792 307 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 CLOCKO15516 846 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 ADAP00813 363 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 YES1P07947 543 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 GKN3PP0CG01 181 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 PSMB1P20618 241 aaKnown RBP11.46□□□□□ -0.57
TREX1-203ENST00000456089 TACR3P29371 465 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 OR2B6P58173 313 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 CDK6Q00534 326 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 GUCY1A3Q02108 690 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 RASGEF1BQ0VAM2 473 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
TREX1-203ENST00000456089 EPS8Q12929 822 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 NFYCQ13952 458 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 CAPRIN1Q14444 709 aaKnown RBP11.46□□□□□ -0.57
TREX1-203ENST00000456089 TAB1Q15750 504 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 MMEL1Q495T6 779 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 RNF220Q5VTB9 566 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 REEP3Q6NUK4 255 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 DHDDSQ86SQ9 333 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 GABRG1Q8N1C3 465 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.57
TREX1-203ENST00000456089 LILRB1Q8NHL6 650 aaPredicted RBP11.46□□□□□ -0.57
TREX1-203ENST00000456089 NFKBIDQ8NI38 313 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms