RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 WDR55Q9H6Y2 383 aaPredicted RBP14.09□□□□□ -0.15
GPC1-206ENST00000455111 SERINC1Q9NRX5 453 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 SLC7A10Q9NS82 523 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 NOSIPQ9Y314 301 aaKnown RBP14.09□□□□□ -0.15
GPC1-206ENST00000455111 TMED7Q9Y3B3 224 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 FLVCR1Q9Y5Y0 555 aa14.09□□□□□ -0.15
GPC1-206ENST00000455111 SONP18583 2426 aaKnown RBP14.09□□□□□ -0.15
GPC1-206ENST00000455111 SVEP1Q4LDE5 3571 aa14.08□□□□□ -0.15
GPC1-206ENST00000455111 CCDC154A6NI56 674 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 TACR3P29371 465 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 P2RY4P51582 365 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 PPP2R2BQ00005 443 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 EPS8Q12929 822 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 GTDC1Q4AE62 458 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 TSPO2Q5TGU0 170 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 C9orf135Q5VTT2 229 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 LRRC34Q8IZ02 419 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 OIT3Q8WWZ8 545 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 GTPBP3Q969Y2 492 aaKnown RBP14.08□□□□□ -0.16
GPC1-206ENST00000455111 APH1AQ96BI3 265 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.16
GPC1-206ENST00000455111 TRMT61AQ96FX7 289 aaKnown RBP14.08□□□□□ -0.16
GPC1-206ENST00000455111 USB1Q9BQ65 265 aaKnown RBP14.08□□□□□ -0.16
GPC1-206ENST00000455111 C1QTNF6Q9BXI9 259 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 ADAM19Q9H013 955 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 NGBQ9NPG2 151 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.08□□□□□ -0.16
GPC1-206ENST00000455111 RLIMQ9NVW2 624 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 TMEM181Q9P2C4 612 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 PCDHGB4Q9UN71 923 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 HDGFL3Q9Y3E1 203 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 ABCA1O95477 2261 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 DSPPQ9NZW4 1301 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 PLCE1Q9P212 2302 aa14.08□□□□□ -0.16
GPC1-206ENST00000455111 TM9SF1O15321 606 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 RGS16O15492 202 aaPredicted RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 AGR2O95994 175 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 CD40P25942 277 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 S100A3P33764 101 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 TTKP33981 857 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 ACAA2P42765 397 aaKnown RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 OR2B6P58173 313 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 DMTNQ08495 405 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 STX3Q13277 289 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 SLC17A1Q14916 467 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 ETFDHQ16134 617 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 ATAD3BQ5T9A4 648 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 LRRC74BQ6ZQY2 392 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 VRK2Q86Y07 508 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 ARFGAP2Q8N6H7 521 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 OR10H5Q8NGA6 315 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 ZNF385AQ96PM9 386 aaKnown RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 TRNT1Q96Q11 434 aaKnown RBP14.07□□□□□ -0.16
GPC1-206ENST00000455111 CACNG6Q9BXT2 260 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 ALPK2Q86TB3 2170 aa14.07□□□□□ -0.16
GPC1-206ENST00000455111 FBN3Q75N90 2809 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 ARFGEF3Q5TH69 2177 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 FAAHO00519 579 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 ZNF208O43345 1280 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 DNPH1O43598 174 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 CD5LO43866 347 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 SSX4O60224 188 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 SNNO75324 88 aaPredicted RBP14.06□□□□□ -0.16
GPC1-206ENST00000455111 PGRP06401 933 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 GKN3PP0CG01 181 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 PRG2P13727 222 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 EPHA3P29320 983 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
GPC1-206ENST00000455111 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
GPC1-206ENST00000455111 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 BNIP2Q12982 314 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 ZNF836Q6ZNA1 936 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 LINGO2Q7L985 606 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 UBE2J2Q8N2K1 259 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
GPC1-206ENST00000455111 TMEM99Q8N816 258 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 PIGXQ8TBF5 258 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 TAS2R16Q9NYV7 291 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 EMC3Q9P0I2 261 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 TRAPPC4Q9Y296 219 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
GPC1-206ENST00000455111 RTTNQ86VV8 2226 aa14.06□□□□□ -0.16
GPC1-206ENST00000455111 LY6HO94772 140 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 ETFAP13804 333 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
GPC1-206ENST00000455111 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
GPC1-206ENST00000455111 DPY19L1Q2PZI1 675 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 RPS26P11Q5JNZ5 115 aaPredicted RBP14.05□□□□□ -0.16
GPC1-206ENST00000455111 CEP85LQ5SZL2 805 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 NANOS1Q8WY41 292 aaKnown RBP14.05□□□□□ -0.16
GPC1-206ENST00000455111 VPS33AQ96AX1 596 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 MUCL1Q96DR8 90 aa14.05□□□□□ -0.16
GPC1-206ENST00000455111 MAELQ96JY0 434 aaKnown RBP14.05□□□□□ -0.16
GPC1-206ENST00000455111 OR52E6Q96RD3 313 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms