RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PPP3R1P63098 170 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 PSG6Q00889 435 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 SSPNQ14714 243 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 ZNF770Q6IQ21 691 aaPredicted RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 KLHL17Q6TDP4 642 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 IL22RA1Q8N6P7 574 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 PMM1Q92871 262 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 LCORQ96JN0 433 aaPredicted RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 DHRS9Q9BPW9 319 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 G6PC3Q9BUM1 346 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 ZNF700Q9H0M5 742 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 C11orf54Q9H0W9 315 aaPredicted RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 RANGRFQ9HD47 186 aaPredicted RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 SEC14L3Q9UDX4 400 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 NUFIP1Q9UHK0 495 aaKnown RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 MRTO4Q9UKD2 239 aaKnown RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 DTX4Q9Y2E6 619 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 GPR55Q9Y2T6 319 aaPredicted RBP14.56□□□□□ -0.08
SNX17-204ENST00000453453 PCDHGB7Q9Y5F8 929 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 FABP12A6NFH5 140 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 FRG2CA6NGY1 282 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 ERVH48-1M5A8F1 160 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 OPN1SWP03999 348 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CPEP16870 476 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 OTX2P32243 289 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 MAP2K3P46734 347 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 AP2S1P53680 142 aaPredicted RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 SLC26A5P58743 744 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 ALDH6A1Q02252 535 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 EBPQ15125 230 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 EXT1Q16394 746 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 FAM69BQ5VUD6 431 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CCDC28AQ8IWP9 274 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 AQP11Q8NBQ7 271 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 NFAM1Q8NET5 270 aaPredicted RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 OR8J1Q8NGP2 316 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 NACC2Q96BF6 587 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 FAM122AQ96E09 287 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 SDF2Q99470 211 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 WDR77Q9BQA1 342 aaPredicted RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 UCK2Q9BZX2 261 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 SEMA4CQ9C0C4 833 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 WWTR1Q9GZV5 400 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 MIXL1Q9H2W2 232 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 MTHFD2LQ9H903 347 aaPredicted RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 ING3Q9NXR8 418 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CBLCQ9ULV8 474 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 DIMT1Q9UNQ2 313 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 HS3ST3B1Q9Y662 390 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 GXYLT2A0PJZ3 443 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 SHOXO15266 292 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 DXOO77932 396 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 IFNW1P05000 195 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CT45A8P0DMV1 189 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CT45A9P0DMV2 189 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 DRD5P21918 477 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CFL1P23528 166 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 SDC2P34741 201 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 GPR143P51810 404 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 PSMD4P55036 377 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 SMIM11AP58511 58 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 RPS18P62269 152 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 EFR3AQ14156 821 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 PCOLCEQ15113 449 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 TAB1Q15750 504 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 DECR1Q16698 335 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CYP27C1Q4G0S4 372 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 CT45A2Q5DJT8 189 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 PLET1Q6UQ28 207 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 NPSR1Q6W5P4 371 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 NDUFAF7Q7L592 441 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 C9orf40Q8IXQ3 194 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 TAGAPQ8N103 731 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 ZNF619Q8N2I2 560 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 C17orf47Q8NEP4 570 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 OR9Q2Q8NGE9 314 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 OR5L2Q8NGL0 311 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 COQ7Q99807 217 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 ZNF350Q9GZX5 532 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 SLC38A1Q9H2H9 487 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 NMNAT1Q9HAN9 279 aaPredicted RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 ASCL3Q9NQ33 180 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 PLSCR3Q9NRY6 295 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 SNTG1Q9NSN8 517 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 RBFOX1Q9NWB1 397 aaKnown RBP14.55□□□□□ -0.08
SNX17-204ENST00000453453 B3GNT2Q9NY97 397 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 TAS2R16Q9NYV7 291 aa14.55□□□□□ -0.08
SNX17-204ENST00000453453 IGHV1-45A0A0A0MS14 117 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 NSG1A0A0A6YYJ2 146 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 TRBV11-1A0A0K0K1C0 115 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 FAAHO00519 579 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 MYL12BO14950 172 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 ENTPD6O75354 484 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 SLC43A1O75387 559 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 CYP7B1O75881 506 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 GUSBP08236 651 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 ADRA2AP08913 450 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 COX6A1P12074 109 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 OR3A3P47888 321 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 RFX3P48380 749 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms