RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ZNF525Q8N782 197 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 OR5P2Q8WZ92 322 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 ST8SIA1Q92185 356 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 FAM168AQ92567 244 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 TEX37Q96LM6 180 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 KCNE3Q9Y6H6 103 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 UBDO15205 165 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 LMX1BO60663 402 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 KRT16P08779 473 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 CSF3P09919 207 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 UBL4AP11441 157 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 BMP4P12644 408 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 EFNA1P20827 205 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 MAPK1P28482 360 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 NTF4P34130 210 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 RPL3P39023 403 aaKnown RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 CCT3P49368 545 aaKnown RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 RNF144AP50876 292 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 FABP6P51161 128 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 ZNF83P51522 516 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 NME5P56597 212 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 CSNK2A1P68400 391 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
HERC3-207ENST00000452979 MAD2L1Q13257 205 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 GABRA6Q16445 453 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 ABLIM2Q6H8Q1 611 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 B3GLCTQ6Y288 498 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 DEPDC4Q8N2C3 294 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 NATD1Q8N6N6 113 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 OR56A1Q8NGH5 318 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 OR9I1Q8NGQ6 314 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 OR52N5Q8NH56 324 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 OR5B2Q96R09 309 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 SDF2Q99470 211 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 INPP5KQ9BT40 448 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 NMUR2Q9GZQ4 415 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 LAT2Q9GZY6 243 aa10.25□□□□□ -0.77
HERC3-207ENST00000452979 SDR39U1Q9NRG7 319 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 FAF1Q9UNN5 650 aaPredicted RBP10.25□□□□□ -0.77
HERC3-207ENST00000452979 HEATR1Q9H583 2144 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 CIB4A0PJX0 185 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SERINC4A6NH21 518 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 VWC2LB2RUY7 222 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SULT2B1O00204 365 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SCAMP2O15127 329 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 RAD51DO75771 328 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 LAMP1P11279 417 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 IDO1P14902 403 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 IL12AP29459 219 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 HPCAL1P37235 193 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 MRPL19P49406 292 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 GZMKP49863 264 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SLC16A1P53985 500 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SESN3P58005 492 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 UFM1P61960 85 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 CBX1P83916 185 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 CHRNB3Q05901 458 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SPOCK1Q08629 439 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SKP2Q13309 424 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 ZNF141Q15928 474 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 GSTA3Q16772 222 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 PDCD4Q53EL6 469 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 AP1ARQ63HQ0 302 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 OR7E24Q6IFN5 339 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 RIMKLAQ8IXN7 391 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 ARIH2OSQ8N7S6 290 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 OR7A2PQ8NGA2 310 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 SLC25A43Q8WUT9 341 aaPredicted RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 HTRA1Q92743 480 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 APH1AQ96BI3 265 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 MOAP1Q96BY2 351 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 COQ8BQ96D53 544 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 THUMPD3Q9BV44 507 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 QRSL1Q9H0R6 528 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 SERINC1Q9NRX5 453 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 ACER3Q9NUN7 267 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 ASB6Q9NWX5 421 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 TAS2R16Q9NYV7 291 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 EMC3Q9P0I2 261 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 MALT1Q9UDY8 824 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 KCNE5Q9UJ90 142 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 POU2F3Q9UKI9 436 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
HERC3-207ENST00000452979 PLCE1Q9P212 2302 aa10.24□□□□□ -0.77
HERC3-207ENST00000452979 NUP214P35658 2090 aaPredicted RBP10.23□□□□□ -0.77
HERC3-207ENST00000452979 PDLIM1O00151 329 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 NDUFS8O00217 210 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 NDUFAB1O14561 156 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 GPR171O14626 319 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 DNPH1O43598 174 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 IGHV3-9P01782 118 aa10.23□□□□□ -0.77
HERC3-207ENST00000452979 ZNF16P17020 682 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms