RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BCO1Q9HAY6 547 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 SLC25A37Q9NYZ2 338 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 VAPAQ9P0L0 249 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 TMEM181Q9P2C4 612 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 GPR52Q9Y2T5 361 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 HDGFL3Q9Y3E1 203 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 ITPR3Q14573 2671 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 PRR14LQ5THK1 2151 aa8.58□□□□□ -1.04
USP54-207ENST00000451492 A0A0G2JND7 137 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 A0A0G2JPF8 293 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 A0A1W2PR80 420 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ZNF716A6NP11 495 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 HNRNPCL2B2RXH8 293 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 HNRNPCL3B7ZW38 293 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 KLF4O43474 513 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 HNRNPCL1O60812 293 aaKnown RBP8.57□□□□□ -1.04
USP54-207ENST00000451492 SMPD2O60906 423 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 AKR7A3O95154 331 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 HNRNPCL4P0DMR1 293 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 HOXB9P17482 250 aaPredicted RBP8.57□□□□□ -1.04
USP54-207ENST00000451492 FPR1P21462 350 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 IGHV1-2P23083 117 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 AQP1P29972 269 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 IDUAP35475 653 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 SLC1A3P43003 542 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 MAGEA8P43361 318 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 COPZ1P61923 177 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ADAM8P78325 824 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 NKX6-1P78426 367 aaPredicted RBP8.57□□□□□ -1.04
USP54-207ENST00000451492 CEACAM7Q14002 265 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 TAB1Q15750 504 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ACKR1Q16570 336 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 OTUD3Q5T2D3 398 aaPredicted RBP8.57□□□□□ -1.04
USP54-207ENST00000451492 GCNT6Q5T4J0 391 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 RNF220Q5VTB9 566 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 Q6ZT83 130 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 MTDHQ86UE4 582 aaKnown RBP8.57□□□□□ -1.04
USP54-207ENST00000451492 GPAT4Q86UL3 456 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ZNF440Q8IYI8 595 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 BBS10Q8TAM1 723 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 RNF217Q8TC41 542 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 NEUROG1Q92886 237 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 MBD6Q96DN6 1003 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 VIPAS39Q9H9C1 493 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 GP6Q9HCN6 339 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ADPRHL2Q9NX46 363 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 ABCA4P78363 2273 aa8.57□□□□□ -1.04
USP54-207ENST00000451492 CIB4A0PJX0 185 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 CCT8L1PA6NM43 557 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ZNF724A8MTY0 619 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 EDF1O60869 148 aaKnown RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 MRPL33O75394 65 aaKnown RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 THBS1P07996 1170 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ARAFP10398 606 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ACAA2P42765 397 aaKnown RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 PCYT1AP49585 367 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 NR1H2P55055 460 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 FOXG1P55316 489 aaPredicted RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 SLC35A1P78382 337 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 FAPQ12884 760 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 FADDQ13158 208 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ITGADQ13349 1161 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 Q5PR19 223 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 LRIF1Q5T3J3 769 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 WBP2NLQ6ICG8 309 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ADAM5Q6NVV9 412 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 DHDDSQ86SQ9 333 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 TMEM99Q8N816 258 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 KBTBD8Q8NFY9 601 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 OR52E4Q8NGH9 312 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 OR52N5Q8NH56 324 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 AKAP1Q92667 903 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP54-207ENST00000451492 APH1AQ96BI3 265 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 C3orf49Q96BT1 292 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 NAA11Q9BSU3 229 aaPredicted RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 SPATA9Q9BWV2 254 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 TAPBPLQ9BX59 468 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 POTEKPQ9BYX7 375 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 IKZF5Q9H5V7 419 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ARMC7Q9H6L4 198 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 A4GALTQ9NPC4 353 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 BEX4Q9NWD9 120 aaPredicted RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 THUMPD1Q9NXG2 353 aaKnown RBP8.56□□□□□ -1.04
USP54-207ENST00000451492 UPB1Q9UBR1 384 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 RPS6KB2Q9UBS0 482 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 ZNF232Q9UNY5 417 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 IFT52Q9Y366 437 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 CHST2Q9Y4C5 530 aa8.56□□□□□ -1.04
USP54-207ENST00000451492 EVPLLA8MZ36 301 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 FAAHO00519 579 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 ANGPT2O15123 496 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 ZNF208O43345 1280 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 PGM3O95394 542 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 OPN1SWP03999 348 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 GPIP06744 558 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms