RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TRBV5-4A0A0C4DH59 114 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 AGAP14A8MT82 685 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 TGM5O43548 720 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SELENOFO60613 162 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 FBXO24O75426 580 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SOD2P04179 222 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 GLAP06280 429 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 EPCAMP16422 314 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 DLSTP36957 453 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 HLA-DQA1Q5Y7H0 255 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SLC51BQ86UW2 128 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 LRRC25Q8N386 305 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 ZSCAN32Q9NX65 697 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 URADA6NGE7 173 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 FOXE1O00358 373 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 TFPIP10646 304 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SYN1P17600 705 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 ITGB7P26010 798 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CD34P28906 385 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CTNNB1P35222 781 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SHC2P98077 582 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 LINC00303Q3SY05 128 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 AMZ1Q400G9 498 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 KIAA1211LQ6NV74 962 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 FAM83HQ6ZRV2 1179 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 DUSP18Q8NEJ0 188 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 TBC1D20Q96BZ9 403 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF285Q96NJ3 590 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 OR1F2PQ96R84 312 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 HRASLSQ9HDD0 168 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 PLEKHM1Q9Y4G2 1056 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SIRT4Q9Y6E7 314 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 A0A1W2PP55 124 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 STK25O00506 426 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 VNN2O95498 520 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CSTAP01040 98 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SBK2P0C263 348 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SEC61A1P61619 476 aaKnown RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CXADRP78310 365 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM65Q6PI78 240 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 OR5AK2Q8NH90 309 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SETD7Q8WTS6 366 aaKnown RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 HCAR1Q9BXC0 346 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SMIM3Q9BZL3 60 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 RNF186Q9NXI6 227 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 DNAJC13O75165 2243 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 A0A0B4J2A0 478 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 FITM1A5D6W6 292 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 PRAMEF2O60811 474 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-204ENST00000449510 PVRP15151 417 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF28P17035 718 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CCR9P51686 369 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 OR7A5Q15622 319 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 NRROSQ86YC3 692 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 OR2L3Q8NG85 312 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM41AQ96HV5 264 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 MS4A8Q9BY19 250 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 A4GALTQ9NPC4 353 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 RXFP3Q9NSD7 469 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 SHPKQ9UHJ6 478 aa11.5□□□□□ -0.57
UBE3B-204ENST00000449510 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 A0A1W2PR48 441 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ACOT7O00154 380 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF888P0CJ79 500 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 CPMP14384 443 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 DRD2P14416 443 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 HTR2AP28223 471 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 CTXN1P60606 82 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 DOC2BQ14184 412 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 LAMTOR1Q6IAA8 161 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 C1orf94Q6P1W5 598 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 TRILQ7L0X0 811 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 FAM219AQ8IW50 185 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 PLA2G15Q8NCC3 412 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 OR2L5Q8NG80 312 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 C5orf34Q96MH7 638 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 C6orf106Q9H6K1 298 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ASB6Q9NWX5 421 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SVILO95425 2214 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ADH1CP00326 375 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 LPLP06858 475 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 OR3A2P47893 321 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 HMGA2P52926 109 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms