RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 SPATA19Q7Z5L4 167 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 Q8N1Y9 231 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 OR4M2Q8NGB6 313 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 OR6Y1Q8NGX8 325 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 CDKL2Q92772 493 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 EXOSC8Q96B26 276 aaKnown RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 ELP4Q96EB1 424 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 ANKRD27Q96NW4 1050 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 ZNF317Q96PQ6 595 aaPredicted RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 CPNE1Q99829 537 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 ELOVL6Q9H5J4 265 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 NOL11Q9H8H0 719 aaKnown RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 TXNDC16Q9P2K2 825 aa6.31□□□□□ -1.4
RBM39-218ENST00000449489 CRNNQ9UBG3 495 aaPredicted RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 NOSIPQ9Y314 301 aaKnown RBP6.31□□□□□ -1.4
RBM39-218ENST00000449489 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 TMEM129A0AVI4 362 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 GXYLT2A0PJZ3 443 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ZNF716A6NP11 495 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 CXorf49A8MYA2 514 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 E7ESA3 106 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 M0QZ24 198 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SCDO00767 359 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 MRPL33O75394 65 aaKnown RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 PRSS23O95084 383 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ESRRBO95718 433 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 IGHV3-9P01782 118 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 IGFBP1P08833 259 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 SAGP10523 405 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 HPGDP15428 266 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 PRKCAP17252 672 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ACHEP22303 614 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 MPGP29372 298 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 CXCR5P32302 372 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SPRP35270 261 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 GPR6P46095 362 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 RFX3P48380 749 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 P2RX1P51575 399 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ARL4CP56559 192 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 CSNK2A1P68400 391 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 TRAF3Q13114 568 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 PPP1R7Q15435 360 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 FAM83EQ2M2I3 478 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SAXO2Q658L1 398 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 REP15Q6BDI9 236 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ACSM5Q6NUN0 579 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 C3orf33Q6P1S2 294 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ANKRD16Q6P6B7 361 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 TMPPEQ6ZT21 453 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 MMGT1Q8N4V1 131 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 C1orf52Q8N6N3 182 aaKnown RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 CDRT4Q8N9R6 151 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ZNF527Q8NB42 609 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 GPR119Q8TDV5 335 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ATP6V1E2Q96A05 226 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SH3YL1Q96HL8 342 aaPredicted RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 PBKQ96KB5 322 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SLC38A2Q96QD8 506 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 GPA33Q99795 319 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 KCNS3Q9BQ31 491 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 KLHDC3Q9BQ90 382 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 DDX18Q9NVP1 670 aaKnown RBP6.3□□□□□ -1.4
RBM39-218ENST00000449489 SIRT5Q9NXA8 310 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 ICAM5Q9UMF0 924 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 PPIAL4AQ9Y536 164 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 X6R8D5 127 aa6.3□□□□□ -1.4
RBM39-218ENST00000449489 NUP214P35658 2090 aaPredicted RBP6.29□□□□□ -1.4
RBM39-218ENST00000449489 hCG_2039718K7EN88 272 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 TIMM23O14925 209 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 KCNK2O95069 426 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 PDYNP01213 254 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 IGLV1-44P01699 117 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 HPXP02790 462 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 PRPS2P11908 318 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 NPR2P20594 1047 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 DDCP20711 480 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 FKBP2P26885 142 aaKnown RBP6.29□□□□□ -1.4
RBM39-218ENST00000449489 DIO1P49895 249 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 NCBP2P52298 156 aaKnown RBP eCLIP6.29□□□□□ -1.4
RBM39-218ENST00000449489 FOXG1P55316 489 aaPredicted RBP6.29□□□□□ -1.4
RBM39-218ENST00000449489 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
RBM39-218ENST00000449489 IL1RL1Q01638 556 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 NAAAQ02083 359 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 ZNF117Q03924 483 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 CD226Q15762 336 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 ADRM1Q16186 407 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 SPIN4Q56A73 249 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 ELFN2Q5R3F8 820 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 GRTP1Q5TC63 336 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 ZCCHC12Q6PEW1 402 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 KLHL24Q6TFL4 600 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 TMEM107Q6UX40 140 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 RAPH1Q70E73 1250 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 ADGRG3Q86Y34 549 aa6.29□□□□□ -1.4
RBM39-218ENST00000449489 CENPLQ8N0S6 344 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms