RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 NUDT13Q86X67 352 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 LURAP1Q96LR2 239 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 SSX3Q99909 188 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 ACSS1Q9NUB1 689 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 MRPL15Q9P015 296 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TRBV4-1A0A0J9YWV2 114 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 LOC390937A0A1W2PQ73 354 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TMEM202A6NGA9 273 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 DVL2O14641 736 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PHYHO14832 338 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 ARPC1BO15143 372 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PIP5K1CO60331 668 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 MTX2O75431 263 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 IFNGR1P15260 489 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 ADCYAP1P18509 176 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 IMPA1P29218 277 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TAS2R43P59537 309 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF14Q5SWL7 426 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PGBD2Q6P3X8 592 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PARS2Q7L3T8 475 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PSMB1P20618 241 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 CDH11P55287 796 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TAS2R41P59536 307 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TRA2BP62995 288 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 E2F1Q01094 437 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 C6orf120Q7Z4R8 191 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 LRRC56Q8IYG6 542 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR4K5Q8NGD3 323 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRRC1Q96M27 445 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 RIOK2Q9BVS4 552 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC38A1Q9H2H9 487 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
SYNGAP1-204ENST00000449372 NPC1O15118 1278 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CREBL2O60519 120 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CPN1P15169 458 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CSF2RBP32927 897 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 VIPR2P41587 438 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 NPBWR1P48145 328 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 PPT1P50897 306 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 LBX1P52954 281 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 GMFBP60983 142 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ST8SIA6P61647 398 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRR5P85299 388 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MAT1AQ00266 395 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF770Q6IQ21 691 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MAMDC2Q7Z304 686 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 KLBQ86Z14 1044 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 GID4Q8IVV7 300 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 NEIL2Q969S2 332 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 RHOVQ96L33 236 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF582Q96NG8 517 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 TSPAN6O43657 245 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 LILRB5O75023 590 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ELFN1P0C7U0 828 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD53P19397 219 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 FCARP24071 287 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MMP15P51511 669 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ST3GAL3Q11203 375 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 FAM78AQ5JUQ0 283 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 C9orf64Q5T6V5 341 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF8Q5VWM4 474 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF7Q5VXH5 474 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MOB3CQ70IA8 216 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 SUN3Q8TAQ9 357 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF764Q96H86 408 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ASB16Q96NS5 453 aa12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD22P20273 847 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 ACHEP22303 614 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC6A11P48066 632 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 KRT33BQ14525 404 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 PEA15Q15121 130 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZSCAN1Q8NBB4 408 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 TRMT10AQ8TBZ6 339 aaKnown RBP12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 THAP4Q8WY91 577 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 MEGF10Q96KG7 1140 aa12.46□□□□□ -0.42
SYNGAP1-204ENST00000449372 PELI2Q9HAT8 420 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms