RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PPP1R2P9O14990 202 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CXCL13O43927 109 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 VAMP5O95183 116 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ABHD16AO95870 558 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 GRPP07492 148 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SP1P08047 785 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HCKP08631 526 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 B4GALNT1Q00973 533 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPA1Q15181 289 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 LTC4SQ16873 150 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF718Q3SXZ3 478 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 MTX3Q5HYI7 312 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM166AQ6J272 317 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADAM5Q6NVV9 412 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ARHGAP22Q7Z5H3 698 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ANKRD37Q7Z713 158 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ISCA2Q86U28 154 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADGRG7Q96K78 797 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 B3GNT4Q9C0J1 378 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HSD3B7Q9H2F3 369 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CISD1Q9NZ45 108 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TCRBV5S1A1TA0A578 114 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 EFCAB9A8MZ26 197 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 LCMT2O60294 686 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 EPXP11678 715 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC6A6P31641 620 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 BNIP2Q12982 314 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HACD2Q6Y1H2 254 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 GJC3Q8NFK1 279 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ST8SIA4Q92187 359 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 MS4A6EQ96DS6 147 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 Q96MF0 132 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PAPOLGQ9BWT3 736 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 UCK2Q9BZX2 261 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC26A1Q9H2B4 701 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCNIP1Q9NZI2 227 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PSME4Q14997 1843 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HIVEP2P31629 2446 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLDN25C9JDP6 229 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 DNAJA2O60884 412 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 UTS2O95399 124 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KNG1P01042 644 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 FGF4P08620 206 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 RPS2P15880 293 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 NAGAP17050 411 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CNR1P21554 472 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HOXA4Q00056 320 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 C18orf21Q32NC0 220 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCTD21Q4G0X4 260 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 DMRTC1Q5HYR2 192 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CYP2R1Q6VVX0 501 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CA13Q8N1Q1 262 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPERTQ8NA61 448 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TBC1D15Q8TC07 691 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 YIPF3Q9GZM5 350 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 GRHL1Q9NZI5 618 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KLHL13Q9P2N7 655 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PACSIN3Q9UKS6 424 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A087WZY1 265 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A096LPI6 279 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 A8MV72 311 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 F5H5K5 113 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 H0YIV9 168 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 GREM1O60565 184 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SCELO95171 688 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 H6PDO95479 791 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC2A5P22732 501 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 C6orf136Q5SQH8 315 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TPRG1LQ5T0D9 272 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 DCST2Q5T1A1 773 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLX4IPQ5VYV7 408 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF793Q6ZN11 406 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CNTN4Q8IWV2 1026 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 METTL4Q8N3J2 472 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR10A6Q8NH74 314 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 C17orf50Q8WW18 174 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 RFKQ969G6 155 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KLHL15Q96M94 604 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCTPQ9UKL6 214 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRBV5-4A0A0C4DH59 114 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TEX13CA0A0J9YWL9 993 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SMIM31A0A1B0GVY4 71 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TNFSF11O14788 317 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HMGN1P05114 100 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRHRP34981 398 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ARFIP1P53367 373 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPP1CAP62136 330 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TUBA1BP68363 451 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SNAPC1Q16533 368 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 STEAP4Q687X5 459 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC6A19Q695T7 634 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR7E24Q6IFN5 339 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF813Q6ZN06 617 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TUBA1AQ71U36 451 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 TDRPQ86YL5 185 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SULF2Q8IWU5 870 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLPPR2Q96GM1 343 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 NSUN5Q96P11 429 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCNA7Q96RP8 456 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms