RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 VPS37AQ8NEZ2 397 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 CNOT9Q92600 299 aaKnown RBP13.64□□□□□ -0.23
TRA2A-203ENST00000448549 ZIM3Q96PE6 472 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 TNFRSF13CQ96RJ3 184 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 INPP5KQ9BT40 448 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 ROPN1BQ9BZX4 212 aaPredicted RBP13.64□□□□□ -0.23
TRA2A-203ENST00000448549 ROPN1Q9HAT0 212 aaPredicted RBP13.64□□□□□ -0.23
TRA2A-203ENST00000448549 EXOSC3Q9NQT5 275 aaKnown RBP13.64□□□□□ -0.23
TRA2A-203ENST00000448549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.64□□□□□ -0.23
TRA2A-203ENST00000448549 TMEM181Q9P2C4 612 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 TRAPPC4Q9Y296 219 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
TRA2A-203ENST00000448549 STAB1Q9NY15 2570 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 PDLIM1O00151 329 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 AP3D1O14617 1153 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 CHI3L1P36222 383 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-203ENST00000448549 KHKP50053 298 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 CASP8Q14790 479 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 TESCQ96BS2 214 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 NEURL3Q96EH8 262 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 SLC35A5Q9BS91 424 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 SLC7A10Q9NS82 523 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 UPB1Q9UBR1 384 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 MARCOQ9UEW3 520 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-203ENST00000448549 TMED7Q9Y3B3 224 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 ATP23Q9Y6H3 246 aa13.63□□□□□ -0.23
TRA2A-203ENST00000448549 CADP27708 2225 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 TMEM72A0PK05 275 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ELOA3DA6NLF2 546 aaPredicted RBP13.62□□□□□ -0.23
TRA2A-203ENST00000448549 H7C417 338 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 HMGN4O00479 90 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 SERPINE1P05121 402 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 IMPDH2P12268 514 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 HTR3AP46098 478 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ABCE1P61221 599 aaKnown RBP13.62□□□□□ -0.23
TRA2A-203ENST00000448549 VSNL1P62760 191 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 SLC35A1P78382 337 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 HPCAP84074 193 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 SLC25A3Q00325 362 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 LOXL1Q08397 574 aaPredicted RBP13.62□□□□□ -0.23
TRA2A-203ENST00000448549 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ELOA3BQ3SY89 546 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 SPANXN4Q5MJ08 99 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 TSPO2Q5TGU0 170 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ZNF544Q6NX49 715 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 RNF130Q86XS8 419 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 ELOA3Q8NG57 546 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 TMEM158Q8WZ71 300 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 FAM168AQ92567 244 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 DDIT4LQ96D03 193 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 C20orf27Q9GZN8 174 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 PARPBPQ9NWS1 579 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 OSGIN1Q9UJX0 560 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 FLVCR1Q9Y5Y0 555 aa13.62□□□□□ -0.23
TRA2A-203ENST00000448549 CHD3Q12873 2000 aaKnown RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 EIF1BO60739 113 aaKnown RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 FAM157CP0CG43 387 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 SLC25A16P16260 332 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 TACR3P29371 465 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 POLR2HP52434 150 aaKnown RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 VLDLRP98155 873 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 SYPL1Q16563 259 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 NANOS1Q8WY41 292 aaKnown RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 PMM1Q92871 262 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 KCNK17Q96T54 332 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 NAA11Q9BSU3 229 aaPredicted RBP13.61□□□□□ -0.23
TRA2A-203ENST00000448549 AMBRA1Q9C0C7 1298 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 FKRPQ9H9S5 495 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 ABCA1O95477 2261 aa13.61□□□□□ -0.23
TRA2A-203ENST00000448549 MXRA5Q9NR99 2828 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 ZC3H12DA2A288 527 aaKnown RBP13.6□□□□□ -0.23
TRA2A-203ENST00000448549 AGAP5A6NIR3 686 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 PHF1O43189 567 aaPredicted RBP13.6□□□□□ -0.23
TRA2A-203ENST00000448549 ZNF208O43345 1280 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 LY6HO94772 140 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 CHRM4P08173 479 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 BMP4P12644 408 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 CR1P17927 2039 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 S100A3P33764 101 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 SLC1A3P43003 542 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
TRA2A-203ENST00000448549 EFNA4P52798 201 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 NME5P56597 212 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 CHRNB3Q05901 458 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 SLC17A1Q14916 467 aa13.6□□□□□ -0.23
TRA2A-203ENST00000448549 CMIPQ8IY22 773 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms