RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TRAPPC4Q9Y296 219 aa21.33■■□□□ 1.01
PMS1-214ENST00000446877 LOC390937A0A1W2PQ73 354 aa21.32■■□□□ 1
PMS1-214ENST00000446877 SMIM23A6NLE4 172 aa21.32■■□□□ 1
PMS1-214ENST00000446877 PDLIM1O00151 329 aa21.32■■□□□ 1
PMS1-214ENST00000446877 EIF1BO60739 113 aaKnown RBP21.32■■□□□ 1
PMS1-214ENST00000446877 SLU7O95391 586 aaKnown RBP21.32■■□□□ 1
PMS1-214ENST00000446877 CCNA2P20248 432 aa21.32■■□□□ 1
PMS1-214ENST00000446877 PGM1P36871 562 aa21.32■■□□□ 1
PMS1-214ENST00000446877 SWI5Q1ZZU3 235 aa21.32■■□□□ 1
PMS1-214ENST00000446877 PGS1Q32NB8 556 aa21.32■■□□□ 1
PMS1-214ENST00000446877 C6orf136Q5SQH8 315 aa21.32■■□□□ 1
PMS1-214ENST00000446877 ATAD3BQ5T9A4 648 aa21.32■■□□□ 1
PMS1-214ENST00000446877 OLIG3Q7RTU3 272 aa21.32■■□□□ 1
PMS1-214ENST00000446877 ZNF540Q8NDQ6 660 aa21.32■■□□□ 1
PMS1-214ENST00000446877 AGR3Q8TD06 166 aa21.32■■□□□ 1
PMS1-214ENST00000446877 OIT3Q8WWZ8 545 aa21.32■■□□□ 1
PMS1-214ENST00000446877 SLC35G5Q96KT7 338 aa21.32■■□□□ 1
PMS1-214ENST00000446877 FOXN4Q96NZ1 517 aa21.32■■□□□ 1
PMS1-214ENST00000446877 VRK1Q99986 396 aaPredicted RBP21.32■■□□□ 1
PMS1-214ENST00000446877 SERHL2Q9H4I8 314 aa21.32■■□□□ 1
PMS1-214ENST00000446877 MYOZ1Q9NP98 299 aaPredicted RBP21.32■■□□□ 1
PMS1-214ENST00000446877 SLC7A10Q9NS82 523 aa21.32■■□□□ 1
PMS1-214ENST00000446877 NPHS1O60500 1241 aa21.31■■□□□ 1
PMS1-214ENST00000446877 AGR2O95994 175 aa21.31■■□□□ 1
PMS1-214ENST00000446877 SLC35A1P78382 337 aa21.31■■□□□ 1
PMS1-214ENST00000446877 MST1LQ2TV78 715 aa21.31■■□□□ 1
PMS1-214ENST00000446877 XKR7Q5GH72 579 aa21.31■■□□□ 1
PMS1-214ENST00000446877 SLC46A3Q7Z3Q1 461 aa21.31■■□□□ 1
PMS1-214ENST00000446877 ADGRG3Q86Y34 549 aa21.31■■□□□ 1
PMS1-214ENST00000446877 C4orf33Q8N1A6 199 aa21.31■■□□□ 1
PMS1-214ENST00000446877 SORCS2Q96PQ0 1159 aa21.31■■□□□ 1
PMS1-214ENST00000446877 KCNS3Q9BQ31 491 aa21.31■■□□□ 1
PMS1-214ENST00000446877 IGHV4-61A0A0C4DH41 118 aa21.3■■□□□ 1
PMS1-214ENST00000446877 RNF103-CHMP3A0A140T963 221 aa21.3■■□□□ 1
PMS1-214ENST00000446877 PGRP06401 933 aa21.3■■□□□ 1
PMS1-214ENST00000446877 MPGP29372 298 aa21.3■■□□□ 1
PMS1-214ENST00000446877 HTR3AP46098 478 aa21.3■■□□□ 1
PMS1-214ENST00000446877 H3F3AP84243 136 aa21.3■■□□□ 1
PMS1-214ENST00000446877 SLC25A3Q00325 362 aa21.3■■□□□ 1
PMS1-214ENST00000446877 MAPK14Q16539 360 aa21.3■■□□□ 1
PMS1-214ENST00000446877 TSPO2Q5TGU0 170 aa21.3■■□□□ 1
PMS1-214ENST00000446877 RIMKLAQ8IXN7 391 aa21.3■■□□□ 1
PMS1-214ENST00000446877 CLEC4FQ8N1N0 589 aa21.3■■□□□ 1
PMS1-214ENST00000446877 ARFGAP2Q8N6H7 521 aa21.3■■□□□ 1
PMS1-214ENST00000446877 FAM71CQ8NEG0 241 aa21.3■■□□□ 1
PMS1-214ENST00000446877 PPCSQ9HAB8 311 aa21.3■■□□□ 1
PMS1-214ENST00000446877 PCDHGB4Q9UN71 923 aa21.3■■□□□ 1
PMS1-214ENST00000446877 WDR45Q9Y484 360 aa21.3■■□□□ 1
PMS1-214ENST00000446877 FLVCR1Q9Y5Y0 555 aa21.3■■□□□ 1
PMS1-214ENST00000446877 SHBGP04278 402 aa21.29■■□□□ 1
PMS1-214ENST00000446877 CDH2P19022 906 aaPredicted RBP21.29■■□□□ 1
PMS1-214ENST00000446877 SERPINF1P36955 418 aa21.29■■□□□ 1
PMS1-214ENST00000446877 IDH2P48735 452 aaKnown RBP21.29■■□□□ 1
PMS1-214ENST00000446877 XAGE5Q8WWM1 108 aa21.29■■□□□ 1
PMS1-214ENST00000446877 PMM1Q92871 262 aa21.29■■□□□ 1
PMS1-214ENST00000446877 DDIT4LQ96D03 193 aa21.29■■□□□ 1
PMS1-214ENST00000446877 OR51I1Q9H343 314 aa21.29■■□□□ 1
PMS1-214ENST00000446877 POLE3Q9NRF9 147 aa21.29■■□□□ 1
PMS1-214ENST00000446877 YLPM1P49750 1951 aaKnown RBP21.28■■□□□ 1
PMS1-214ENST00000446877 KLF11O14901 512 aa21.28■■□□□ 1
PMS1-214ENST00000446877 GUSBP08236 651 aa21.28■■□□□ 1
PMS1-214ENST00000446877 OR12D1P0DN82 309 aa21.28■■□□□ 1
PMS1-214ENST00000446877 ZNF23P17027 643 aa21.28■■□□□ 1
PMS1-214ENST00000446877 CR1LQ2VPA4 569 aa21.28■■□□□ 1
PMS1-214ENST00000446877 TYW3Q6IPR3 259 aaKnown RBP21.28■■□□□ 1
PMS1-214ENST00000446877 EMBQ6PCB8 327 aa21.28■■□□□ 1
PMS1-214ENST00000446877 CLECL1Q8IZS7 167 aa21.28■■□□□ 1
PMS1-214ENST00000446877 ANKS4BQ8N8V4 417 aa21.28■■□□□ 1
PMS1-214ENST00000446877 TUBGCP3Q96CW5 907 aa21.28■■□□□ 1
PMS1-214ENST00000446877 C3orf30Q96M34 536 aa21.28■■□□□ 1
PMS1-214ENST00000446877 EXOSC3Q9NQT5 275 aaKnown RBP21.28■■□□□ 1
PMS1-214ENST00000446877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.28■■□□□ 1
PMS1-214ENST00000446877 MALRD1Q5VYJ5 2156 aa21.27■■□□□ 1
PMS1-214ENST00000446877 TMED7-TICAM2A0A0A6YYA0 188 aa21.27■■□□□ 1
PMS1-214ENST00000446877 TCF21O43680 179 aa21.27■■□□□ 1
PMS1-214ENST00000446877 BCAS1O75363 584 aaPredicted RBP21.27■■□□□ 1
PMS1-214ENST00000446877 G6PDP11413 515 aa21.27■■□□□ 1
PMS1-214ENST00000446877 ALDH3A1P30838 453 aa21.27■■□□□ 1
PMS1-214ENST00000446877 KCNJ10P78508 379 aa21.27■■□□□ 1
PMS1-214ENST00000446877 SLC17A1Q14916 467 aa21.27■■□□□ 1
PMS1-214ENST00000446877 SPATA19Q7Z5L4 167 aa21.27■■□□□ 1
PMS1-214ENST00000446877 RFLNBQ8N5W9 214 aa21.27■■□□□ 1
PMS1-214ENST00000446877 OR4A15Q8NGL6 344 aa21.27■■□□□ 1
PMS1-214ENST00000446877 MIPOL1Q8TD10 442 aa21.27■■□□□ 1
PMS1-214ENST00000446877 ROPN1LQ96C74 230 aa21.27■■□□□ 1
PMS1-214ENST00000446877 OBP2BQ9NPH6 170 aa21.27■■□□□ 1
PMS1-214ENST00000446877 TMED7Q9Y3B3 224 aa21.27■■□□□ 1
PMS1-214ENST00000446877 B9A039 149 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 KRT33AO76009 404 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 CRYAAP02489 173 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 SRP14P37108 136 aaKnown RBP21.26■□□□□ 0.99
PMS1-214ENST00000446877 CLDN8P56748 225 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 HPCAP84074 193 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 MAD2L1Q13257 205 aaPredicted RBP21.26■□□□□ 0.99
PMS1-214ENST00000446877 HIKESHIQ53FT3 197 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 OR4F3Q6IEY1 312 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 AAED1Q7RTV5 226 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 ABHD12BQ7Z5M8 362 aaPredicted RBP21.26■□□□□ 0.99
PMS1-214ENST00000446877 POMGNT2Q8NAT1 580 aa21.26■□□□□ 0.99
PMS1-214ENST00000446877 UBLCP1Q8WVY7 318 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms