RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 OR11G2Q8NGC1 345 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 OR52B4Q8NGK2 314 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF764Q96H86 408 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-203ENST00000445889 NANSQ9NR45 359 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 MED31Q9Y3C7 131 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 OR5K3A6NET4 321 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 RNGTTO60942 597 aaKnown RBP13.11□□□□□ -0.31
ERCC3-203ENST00000445889 PVRP15151 417 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.312e-9■■■■□ 25.8
ERCC3-203ENST00000445889 SEC13P55735 322 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 BTN1A1Q13410 526 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 AGBL4Q5VU57 503 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 VITQ6UXI7 678 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 APOOLQ6UXV4 268 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 NHLRC1Q6VVB1 395 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 OR56B4Q8NH76 319 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 GSX2Q9BZM3 304 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-203ENST00000445889 C12orf4Q9NQ89 552 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 RPS6KB2Q9UBS0 482 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 ST6GALNAC2Q9UJ37 374 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 COPS3Q9UNS2 423 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 SLC27A6Q9Y2P4 619 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 AUP1Q9Y679 476 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 CTSVO60911 334 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SC5DO75845 299 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 CT62P0C5K7 136 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 RRASP10301 218 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SOX2P48431 317 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 HTRA3P83110 453 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SHC2P98077 582 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 GPALPP1Q8IXQ4 340 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 WFIKKN2Q8TEU8 576 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 HGDQ93099 445 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 NMNAT3Q96T66 252 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 MS4A7Q9GZW8 240 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 TSPAN10Q9H1Z9 355 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF69Q9UC07 566 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 TBC1D29Q9UFV1 150 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 IER3IP1Q9Y5U9 82 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 LGALS8O00214 317 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 PRICKLE3O43900 615 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 PEX14O75381 377 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 RCBTB2O95199 551 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF3P17036 446 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 DCTDP32321 178 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 RPS27P42677 84 aaKnown RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 NRG3P56975 720 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 PITPNAQ00169 270 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 KLF9Q13886 244 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 OR8K3Q8NH51 312 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 NR4A3Q92570 626 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 RBPMSQ93062 196 aaKnown RBP13.1□□□□□ -0.31
ERCC3-203ENST00000445889 ELMOD3Q96FG2 381 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 SFXN2Q96NB2 322 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 MGAT4CQ9UBM8 478 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 CFAP54Q96N23 3096 aa13.1□□□□□ -0.31
ERCC3-203ENST00000445889 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 GRXCR1A8MXD5 290 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 H0Y8X5 98 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 SIGLEC5O15389 551 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 PIN1P1O15428 100 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 FGF17O60258 216 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 LYPD3O95274 346 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 UCHL1P09936 223 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 CMPK1P30085 196 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 RPS11P62280 158 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TAGLNQ01995 201 aaKnown RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 SIGLEC14Q08ET2 396 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 PLA2G7Q13093 441 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 DUSP8Q13202 625 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ZMYND11Q15326 602 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 FAM198BQ6UWH4 519 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 GRAMD2AQ8IUY3 354 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 JAM3Q9BX67 310 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 FGF22Q9HCT0 170 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 HRASLSQ9HDD0 168 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms