RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 PRSS50Q9UI38 385 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 LEF1Q9UJU2 399 aaPredicted RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 TRAPPC4Q9Y296 219 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 GMEB1Q9Y692 573 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 AKAP9Q99996 3911 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ZNF724A8MTY0 619 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ANGPT2O15123 496 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ANKRD17O75179 2603 aaKnown RBP13.09□□□□□ -0.31
USE1-202ENST00000445667 ETS2P15036 469 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 PSMB1P20618 241 aaKnown RBP13.09□□□□□ -0.31
USE1-202ENST00000445667 FPR1P21462 350 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 DNASE1P24855 282 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 OR3A2P47893 321 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 COPZ1P61923 177 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 SELPLGQ14242 412 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ADRM1Q16186 407 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ZSWIM7Q19AV6 140 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 METTL21CQ5VZV1 264 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 ALKBH2Q6NS38 261 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 REEP3Q6NUK4 255 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 GALNT5Q7Z7M9 940 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 DHDDSQ86SQ9 333 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 NINJ1Q92982 152 aa13.09□□□□□ -0.31
USE1-202ENST00000445667 KLF4O43474 513 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 TPST1O60507 370 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 VIMP08670 466 aaKnown RBP13.08□□□□□ -0.32
USE1-202ENST00000445667 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
USE1-202ENST00000445667 PPP3CBP16298 524 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 LOXP28300 417 aaPredicted RBP13.08□□□□□ -0.32
USE1-202ENST00000445667 SLC35A1P78382 337 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 H3F3AP84243 136 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 CEACAM7Q14002 265 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 SCARB2Q14108 478 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 KEAP1Q14145 624 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 PDK3Q15120 406 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 GLIPR1L2Q4G1C9 344 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 COMTD1Q86VU5 262 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 WFDC8Q8IUA0 241 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 DPP10Q8N608 796 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 S100PBPQ96BU1 408 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 ANKRD27Q96NW4 1050 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 CGREF1Q99674 301 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 TMEM38AQ9H6F2 299 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 EDARQ9UNE0 448 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 CORO2BQ9UQ03 480 aa13.08□□□□□ -0.32
USE1-202ENST00000445667 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 DNPH1O43598 174 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 ATE1O95260 518 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 RAF1P04049 648 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 SLC6A2P23975 617 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 AQP1P29972 269 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 NTF4P34130 210 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 MAP2K6P52564 334 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 ARFIP2P53365 341 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 MTPNP58546 118 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 NFYCQ13952 458 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 CAPRIN1Q14444 709 aaKnown RBP13.07□□□□□ -0.32
USE1-202ENST00000445667 OR7A5Q15622 319 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 KRT73Q86Y46 540 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 STEAP2Q8NFT2 490 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 TSPEARQ8WU66 669 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 PRR14Q9BWN1 585 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 HDHD5Q9BXW7 423 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 OR10A4Q9H209 315 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 EMC3Q9P0I2 261 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 NOSIPQ9Y314 301 aaKnown RBP13.07□□□□□ -0.32
USE1-202ENST00000445667 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
USE1-202ENST00000445667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
USE1-202ENST00000445667 FBP2O00757 339 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 EIF1BO60739 113 aaKnown RBP13.06□□□□□ -0.32
USE1-202ENST00000445667 LYZL6O75951 148 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 AKR7A3O95154 331 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 IL32P24001 234 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 ADSLP30566 484 aaPredicted RBP13.06□□□□□ -0.32
USE1-202ENST00000445667 PRKAR1BP31321 381 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 IDUAP35475 653 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 ITGADQ13349 1161 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 P2RY6Q15077 328 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 DHRS4L2Q6PKH6 230 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 Q6ZT83 130 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 PTOV1Q86YD1 416 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 TMEM99Q8N816 258 aa13.06□□□□□ -0.32
USE1-202ENST00000445667 HIPK4Q8NE63 616 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms