RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ASB6Q9NWX5 421 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 NPAP1Q9NZP6 1156 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 RAB21Q9UL25 225 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 TRAPPC4Q9Y296 219 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 TMED7Q9Y3B3 224 aa18.56■□□□□ 0.56
VSX1-206ENST00000444511 TRPC5OSA6NMA1 111 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 ABCD4O14678 606 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 HDAC3O15379 428 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 UQCRBP14927 111 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 IL7RP16871 459 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 SLC16A1P53985 500 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 GLB1L3Q8NCI6 653 aaPredicted RBP18.55■□□□□ 0.56
VSX1-206ENST00000444511 OR52N5Q8NH56 324 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 PMM1Q92871 262 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 THAP1Q9NVV9 213 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 TAS2R16Q9NYV7 291 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 OSGIN1Q9UJX0 560 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 GPR45Q9Y5Y3 372 aa18.55■□□□□ 0.56
VSX1-206ENST00000444511 CFAP73A6NFT4 308 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 SHISA9B4DS77 424 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 RNF223E7ERA6 249 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 ZNF208O43345 1280 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 EIF1BO60739 113 aaKnown RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 KRT75O95678 551 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 DBIP07108 87 aaKnown RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 KITP10721 976 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 TACR3P29371 465 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 SLC1A3P43003 542 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 SLC35A1P78382 337 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 COX20Q5RI15 118 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 MRPL2Q5T653 305 aaKnown RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 NXNQ6DKJ4 435 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 TMEM108Q6UXF1 575 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 MGARPQ8TDB4 240 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 RADILQ96JH8 1075 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 HS6ST2Q96MM7 605 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 NAA11Q9BSU3 229 aaPredicted RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 TRAF4Q9BUZ4 470 aaPredicted RBP18.54■□□□□ 0.56
VSX1-206ENST00000444511 SLCO5A1Q9H2Y9 848 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 MALT1Q9UDY8 824 aa18.54■□□□□ 0.56
VSX1-206ENST00000444511 HIVEP2P31629 2446 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 TMEM120BA0PK00 339 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 TMEM72A0PK05 275 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 FAAHO00519 579 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 RFXANKO14593 260 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 RPS4Y1P22090 263 aaKnown RBP18.53■□□□□ 0.56
VSX1-206ENST00000444511 NTF4P34130 210 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 ACVR1BP36896 505 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 ZNF83P51522 516 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 MAP2K6P52564 334 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 WDR4P57081 412 aaKnown RBP18.53■□□□□ 0.56
VSX1-206ENST00000444511 KLHL17Q6TDP4 642 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 CASP12Q6UXS9 341 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 PRIMA1Q86XR5 153 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 PEX5LQ8IYB4 626 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 PARPBPQ9NWS1 579 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 MGAT4BQ9UQ53 548 aa18.53■□□□□ 0.56
VSX1-206ENST00000444511 SLCO1B7G3V0H7 640 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 SNNO75324 88 aaPredicted RBP18.52■□□□□ 0.56
VSX1-206ENST00000444511 CD8AP01732 235 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 IGHV4-39P01824 125 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 IL6P05231 212 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 IMPDH2P12268 514 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 IDO1P14902 403 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 PTAFRP25105 342 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 H3F3AP84243 136 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 EPS8Q12929 822 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 AGAP6Q5VW22 663 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 ATG16L1Q676U5 607 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 OR7E24Q6IFN5 339 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 SLC22A25Q6T423 547 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 DTX2Q86UW9 622 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 ZNF440Q8IYI8 595 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 MAPK1IP1LQ8NDC0 245 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 REG4Q9BYZ8 158 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 GRIP2Q9C0E4 1043 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 BARX1Q9HBU1 254 aaPredicted RBP18.52■□□□□ 0.56
VSX1-206ENST00000444511 P2RX2Q9UBL9 471 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 UPB1Q9UBR1 384 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 POU2F3Q9UKI9 436 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 SLC9A8Q9Y2E8 581 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 SLC25A15Q9Y619 301 aa18.52■□□□□ 0.56
VSX1-206ENST00000444511 A0A1W2PR80 420 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 NDUFS7O75251 213 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 SLC22A3O75751 556 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 ANP32DO95626 131 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 GABRA6Q16445 453 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 PDCD4Q53EL6 469 aaKnown RBP18.51■□□□□ 0.55
VSX1-206ENST00000444511 OR52E4Q8NGH9 312 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 GDF2Q9UK05 429 aaPredicted RBP18.51■□□□□ 0.55
VSX1-206ENST00000444511 FLVCR1Q9Y5Y0 555 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 CSPG4Q6UVK1 2322 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 TLN2Q9Y4G6 2542 aa18.51■□□□□ 0.55
VSX1-206ENST00000444511 ZC3H12DA2A288 527 aaKnown RBP18.5■□□□□ 0.55
VSX1-206ENST00000444511 M0R1B8 84 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 ZNF500O60304 480 aaPredicted RBP18.5■□□□□ 0.55
VSX1-206ENST00000444511 ITGA5P08648 1049 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 PTNP21246 168 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 CXCR1P25024 350 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms