RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CFAP73A6NFT4 308 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 CLDN24A6NM45 220 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ZNF716A6NP11 495 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 RFXANKO14593 260 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ZNF208O43345 1280 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 BCAS1O75363 584 aaPredicted RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 PGM3O95394 542 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ANP32DO95626 131 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 PGRP06401 933 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 IDO1P14902 403 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ACVR1BP36896 505 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ZNF83P51522 516 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 MAP2K6P52564 334 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 SLC16A1P53985 500 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 COPZ1P61923 177 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 UFM1P61960 85 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 PHC1P78364 1004 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 TGFBR3Q03167 851 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 SYPL1Q16563 259 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 LIN52Q52LA3 116 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ATG16L1Q676U5 607 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 KLHL24Q6TFL4 600 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 DNAJC14Q6Y2X3 702 aaPredicted RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 ATG4DQ86TL0 474 aaPredicted RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 FBXL14Q8N1E6 418 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 ANKFN1Q8N957 763 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 PNPT1Q8TCS8 783 aaKnown RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 CNOT9Q92600 299 aaKnown RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 ARL5BQ96KC2 179 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 TRAF4Q9BUZ4 470 aaPredicted RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 C20orf27Q9GZN8 174 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 SLCO5A1Q9H2Y9 848 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 MTHFD2LQ9H903 347 aaPredicted RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 THAP1Q9NVV9 213 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 CALML5Q9NZT1 146 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 P2RX2Q9UBL9 471 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 MALT1Q9UDY8 824 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 TRAPPC4Q9Y296 219 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 TMED7Q9Y3B3 224 aa10.39□□□□□ -0.75
TTC28-203ENST00000442232 HEATR1Q9H583 2144 aaKnown RBP10.39□□□□□ -0.75
TTC28-203ENST00000442232 GOLGA8QA0A0J9YX86 632 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 TMEM72A0PK05 275 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 FAM234BA2RU67 622 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 GOLGA8OA6NCC3 632 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 AGAP5A6NIR3 686 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SHISA9B4DS77 424 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 GOLGA8NF8WBI6 632 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SLCO1B7G3V0H7 640 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 M0R1B8 84 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 FAAHO00519 579 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SDHDO14521 159 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 AP3D1O14617 1153 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 HDAC3O15379 428 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 RAMP1O60894 148 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 IL6P05231 212 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 GPIP06744 558 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 CHRM4P08173 479 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 ALDOCP09972 364 aaKnown RBP10.38□□□□□ -0.75
TTC28-203ENST00000442232 KITP10721 976 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 CXCR1P25024 350 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 EDNRAP25101 427 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 PTAFRP25105 342 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 EPHA3P29320 983 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 TACR3P29371 465 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SLC1A3P43003 542 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 NUDT6P53370 316 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 PGGHGQ32M88 737 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 MRPL2Q5T653 305 aaKnown RBP10.38□□□□□ -0.75
TTC28-203ENST00000442232 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 ABHD12BQ7Z5M8 362 aaPredicted RBP10.38□□□□□ -0.75
TTC28-203ENST00000442232 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 ADGRG3Q86Y34 549 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 CCDC103Q8IW40 242 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 MGARPQ8TDB4 240 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 ZG16BQ96DA0 208 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 RHNO1Q9BSD3 238 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 INPP5KQ9BT40 448 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 TAPBPLQ9BX59 468 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 REG4Q9BYZ8 158 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 GRIP2Q9C0E4 1043 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SLC38A1Q9H2H9 487 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 ARMC7Q9H6L4 198 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 RMND5AQ9H871 391 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 NKIRAS1Q9NYS0 192 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 NPAP1Q9NZP6 1156 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 OSGIN1Q9UJX0 560 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 AMDHD2Q9Y303 409 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 CR1P17927 2039 aa10.38□□□□□ -0.75
TTC28-203ENST00000442232 SLC22A3O75751 556 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 KRT33AO76009 404 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 WNT11O96014 354 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 IGHV4-39P01824 125 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 GSNP06396 782 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 BMP4P12644 408 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 NCF2P19878 526 aaPredicted RBP10.37□□□□□ -0.75
TTC28-203ENST00000442232 CDKN2CP42773 168 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 CRATP43155 626 aa10.37□□□□□ -0.75
TTC28-203ENST00000442232 CRISP3P54108 245 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms