RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ID1P41134 155 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 YWHAGP61981 247 aaKnown RBP eCLIP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 UAP1Q16222 522 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF74Q16587 644 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 GOLGA7BQ2TAP0 167 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DCAF4L1Q3SXM0 396 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TECRLQ5HYJ1 363 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF841Q6ZN19 808 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DPY19L2P2Q6ZN68 376 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRIM69Q86WT6 500 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DND1Q8IYX4 353 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 GTPBP8Q8N3Z3 284 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 C8orf46Q8TAG6 207 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 KCTD4Q8WVF5 259 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SECTM1Q8WVN6 248 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NELFBQ8WX92 580 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 PYDC1Q8WXC3 89 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ELMO1Q92556 727 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NEUROG1Q92886 237 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPL3LQ92901 407 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRPL24Q96A35 216 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 IL17FQ96PD4 163 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DUX5Q96PT3 197 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CTRCQ99895 268 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB11FIP5Q9BXF6 653 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 HOXD1Q9GZZ0 328 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 UPF3AQ9H1J1 476 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC38A10Q9HBR0 1119 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC25A19Q9HC21 320 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SAMSN1Q9NSI8 373 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 THUMPD1Q9NXG2 353 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NYAP2Q9P242 653 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 MYEF2Q9P2K5 600 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RASD1Q9Y272 281 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRPS18BQ9Y676 258 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 V9GYQ6 96 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCNB3Q8WWL7 1395 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CPS1P31327 1500 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CNTNAP2Q9UHC6 1331 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCDC88BA6NC98 1476 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM114B3SHH9 223 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 BET1O15155 118 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CHMP2AO43633 222 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ANXA9O76027 345 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 LYPLA2O95372 231 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SNAP29O95721 258 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RD3LP0DJH9 198 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RGS8P57771 180 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDR2Q01850 454 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 FGL1Q08830 312 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACSF3Q4G176 576 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 WDR38Q5JTN6 314 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 CYB5R2Q6BCY4 276 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM151BQ6UXP7 276 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRPM8Q7Z2W7 1104 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 GPBP1Q86WP2 473 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DDHD1Q8NEL9 900 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 RHEBL1Q8TAI7 183 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TCP10LQ8TDR4 215 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SCARB1Q8WTV0 552 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 HPSE2Q8WWQ2 592 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NRGNQ92686 78 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 EMG1Q92979 244 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 LMLNQ96KR4 655 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSSK3Q96PN8 268 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRIQ9BWK5 157 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 IL22Q9GZX6 179 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 NXF3Q9H4D5 531 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 EXD2Q9NVH0 621 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 DHRS7Q9Y394 339 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC22A7Q9Y694 548 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 ERBINQ96RT1 1412 aa3.55□□□□□ -1.84
CDC42BPA-207ENST00000441725 GRIN2DO15399 1336 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDK12Q9NYV4 1490 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 EFCAB10A6NFE3 127 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF233A6NK53 670 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PRAC2D3DTV9 90 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PPIAL4DF5H284 164 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 DLGAP1O14490 977 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRAFD1O14545 582 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR1F1O43749 312 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 BCAS1O75363 584 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SERPINB7O75635 380 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PLEKHA8P1O95397 391 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SEC24AO95486 1093 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PIGRP01833 764 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC2A2P11168 524 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CPN1P15169 458 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TNNI1P19237 187 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TGFBR2P37173 567 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 KCNJ3P48549 501 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB9AP51151 201 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SGSHP51688 502 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms